RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 AKAP13Q12802 2813 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 A0A1W2PQH9 124 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 LNP1A1A4G5 178 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 HHLA1C9JL84 531 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 PDXKO00764 312 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 MAP3K13O43283 966 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 CALUO43852 315 aaPredicted RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 FOXD2O60548 495 aaPredicted RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 GREM1O60565 184 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 KIF20AO95235 890 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TOP3BO95985 862 aaKnown RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 ASS1P00966 412 aaKnown RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 FAM200BP0CF97 657 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 SPINK2P20155 84 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 CMA1P23946 247 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 P2RY2P41231 377 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 VAMP7P51809 220 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 AP3M2P53677 418 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 ST3GAL2Q16842 350 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 ZNF394Q53GI3 561 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 C10orf76Q5T2E6 689 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 SNX30Q5VWJ9 437 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 BTBD8Q5XKL5 378 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 CLEC20AQ6ZU45 233 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 DDX42Q86XP3 938 aaKnown RBP eCLIP9.44□□□□□ -0.9
GGA3-207ENST00000578896 SMYD4Q8IYR2 804 aaPredicted RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 OLIG1Q8TAK6 271 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TMC2Q8TDI7 906 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 WHAMMQ8TF30 809 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 OVCA2Q8WZ82 227 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 CYFIP2Q96F07 1278 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 SPATA32Q96LK8 384 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 KLF16Q9BXK1 252 aaPredicted RBP9.44□□□□□ -0.9
GGA3-207ENST00000578896 SLC6A17Q9H1V8 727 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 GOLPH3LQ9H4A5 285 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 CD93Q9NPY3 652 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 SPHK2Q9NRA0 654 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TMEM74BQ9NUR3 256 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 PLK2Q9NYY3 685 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 HPSEQ9Y251 543 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 FRMD4BQ9Y2L6 1034 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 ZFYVE26Q68DK2 2539 aa9.44□□□□□ -0.9
GGA3-207ENST00000578896 TNRC6BQ9UPQ9 1833 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 A0A0A0MRY4 1105 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 FAM92AA1XBS5 289 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 WASH3PC4AMC7 463 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 NEDD8-MDP1E9PL57 170 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 CDX4O14627 284 aaPredicted RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 HOXC11O43248 304 aaPredicted RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 ALDH1A2O94788 518 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 HMBSP08397 361 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 RARGP13631 454 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 P4HA1P13674 534 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 NR2F2P24468 414 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 PMLP29590 882 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 SYKP43405 635 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 TNFRSF4P43489 277 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 MAPK8P45983 427 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 NOVA1P51513 510 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 MAP7D1Q3KQU3 841 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 EOGTQ5NDL2 527 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 KIAA1211LQ6NV74 962 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 SCD5Q86SK9 330 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 UNC93AQ86WB7 457 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 ZNF513Q8N8E2 541 aaPredicted RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 CCDC26Q8TAB7 109 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 DDX1Q92499 740 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 SEMA4DQ92854 862 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 HNRNPABQ99729 332 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 CSNK1G1Q9HCP0 422 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 POLMQ9NP87 494 aaPredicted RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 TLR8Q9NR97 1041 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 DNAJC17Q9NVM6 304 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 DEC1Q9P2X7 70 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 TRAF3IP3Q9Y228 551 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 RAD54BQ9Y620 910 aa9.43□□□□□ -0.9
GGA3-207ENST00000578896 GOLGA4Q13439 2230 aaKnown RBP9.43□□□□□ -0.9
GGA3-207ENST00000578896 SPEGQ15772 3267 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 IKBKBO14920 756 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 HOXB2P14652 356 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 TYRP14679 529 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 GABRG2P18507 467 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 ITPKAP23677 461 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 ATP5C1P36542 298 aaKnown RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 EIF2DP41214 584 aaKnown RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 TUBP50607 506 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 DPYDQ12882 1025 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 FOXC1Q12948 553 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 ADAM9Q13443 819 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms