RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DEUP1Q05D60 604 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ZNF844Q08AG5 666 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 DPYSL3Q14195 570 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 SLC29A2Q14542 456 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 STAT4Q14765 748 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 NOMO1Q15155 1222 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TRIP13Q15645 432 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 UAP1Q16222 522 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 DPYSL2Q16555 572 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TIGD5Q53EQ6 642 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ANKRD20A8PQ5CZ79 823 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 EFHC2Q5JST6 749 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 OVOS1Q6IE37 1185 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 LRRC8DQ7L1W4 858 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ZNF598Q86UK7 904 aaKnown RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 FAM35AQ86V20 835 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 DEFB106AQ8N104 65 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TMEM130Q8N3G9 435 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RIBC1Q8N443 379 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 RIN2Q8WYP3 895 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 PGM2Q96G03 612 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 SERPINB12Q96P63 405 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 HERPUD2Q9BSE4 406 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 SNRNP25Q9BV90 132 aaKnown RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 COLEC11Q9BWP8 271 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 OXCT2Q9BYC2 517 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 B3GNT5Q9BYG0 378 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.59□□□□□ -0.55
SKA2-204ENST00000578519 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 TMEM161AQ9NX61 479 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 AP4E1Q9UPM8 1137 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 PCDHB7Q9Y5E2 793 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 NFS1Q9Y697 457 aa11.59□□□□□ -0.55
SKA2-204ENST00000578519 GOLGB1Q14789 3259 aaKnown RBP11.59□□□□□ -0.55
SKA2-204ENST00000578519 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 BCLAF3A2AJT9 711 aaKnown RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 SRRM3A6NNA2 597 aaPredicted RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 TULP2O00295 520 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 MGEA5O60502 916 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 ABHD2P08910 425 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 ACAT1P24752 427 aaKnown RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 VPS41P49754 854 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 DMTNQ08495 405 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 NR1H3Q13133 447 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 NFE2Q16621 373 aaPredicted RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 DCAF6Q58WW2 860 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 FAM171BQ6P995 826 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 CLEC20AQ6ZU45 233 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 BEND5Q7L4P6 421 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.569e-7■■■■□ 21.9
SKA2-204ENST00000578519 ARL8AQ96BM9 186 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 FAF2Q96CS3 445 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 SLC2A13Q96QE2 648 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 TMEM121Q9BTD3 319 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 DHX35Q9H5Z1 703 aaKnown RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 CSNK1G1Q9HCP0 422 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 DMAP1Q9NPF5 467 aaPredicted RBP11.58□□□□□ -0.56
SKA2-204ENST00000578519 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
SKA2-204ENST00000578519 A0A087WUV0 522 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 TLDC2A0PJX2 215 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 CARNS1A5YM72 827 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 SYN3O14994 580 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 ATP2C2O75185 946 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 TADA2AO75478 443 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 TCEA3O75764 348 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 ZBED1O96006 694 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 LTFP02788 710 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 IBSPP21815 317 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 CYP2F1P24903 491 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 CYP2C18P33260 490 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 MAGEA4P43358 317 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 VEGFBP49765 207 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 HDAC4P56524 1084 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 DAOAP59103 153 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 YWHAHQ04917 246 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 SMARCB1Q12824 385 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 RAB41Q5JT25 222 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 SLC9A4Q6AI14 798 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 PDIK1LQ8N165 341 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 ARHGAP18Q8N392 663 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 NTAN1Q96AB6 310 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 ACSF2Q96CM8 615 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 PCED1BQ96HM7 432 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 RBM15Q96T37 977 aaKnown RBP eCLIP11.57□□□□□ -0.56
SKA2-204ENST00000578519 C11orf84Q9BUA3 381 aaPredicted RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 MRPL9Q9BYD2 267 aaKnown RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 KLC2Q9H0B6 622 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 BRD8Q9H0E9 1235 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms