RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 CCDC13Q8IYE1 715 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 ZBED8Q8IZ13 594 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 SCML4Q8N228 414 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 EMC1Q8N766 993 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 UBA3Q8TBC4 463 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 FAM172AQ8WUF8 416 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 CPT1BQ92523 772 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 HSPH1Q92598 858 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 ZMAT2Q96NC0 199 aaKnown RBP8.6□□□□□ -1.03
SKA2-203ENST00000578105 SMC6Q96SB8 1091 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 CYTH2Q99418 400 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 MTG1Q9BT17 334 aaPredicted RBP8.6□□□□□ -1.03
SKA2-203ENST00000578105 EIF2AQ9BY44 585 aaKnown RBP8.6□□□□□ -1.03
SKA2-203ENST00000578105 FAM49AQ9H0Q0 323 aaPredicted RBP8.6□□□□□ -1.03
SKA2-203ENST00000578105 UPF3AQ9H1J1 476 aaKnown RBP8.6□□□□□ -1.03
SKA2-203ENST00000578105 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 PCDH18Q9HCL0 1135 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.6□□□□□ -1.03
SKA2-203ENST00000578105 KLHL11Q9NVR0 708 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.6□□□□□ -1.03
SKA2-203ENST00000578105 STAP1Q9ULZ2 295 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 TRPV2Q9Y5S1 764 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 SQORQ9Y6N5 450 aa8.6□□□□□ -1.03
SKA2-203ENST00000578105 IQANK1A0A1B0GTG1 560 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SMIM23A6NLE4 172 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 C9IYK1 514 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 GABRDO14764 452 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 GPR182O15218 404 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 TM9SF1O15321 606 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PAPSS1O43252 624 aaPredicted RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 CSDE1O75534 798 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 GCATO75600 419 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 STK10O94804 968 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 SUN1O94901 812 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ZBED1O96006 694 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 MYL3P08590 195 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 MLNP12872 115 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 TPSB2P20231 275 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 NOS2P35228 1153 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 FDFT1P37268 417 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ARL4AP40617 200 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 MATKP42679 507 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SLCO1A2P46721 670 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 HUNKP57058 714 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 MRPS6P82932 125 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 PDIA2Q13087 525 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 SPARCL1Q14515 664 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 TPSAB1Q15661 275 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SMTNL2Q2TAL5 461 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SLC25A52Q3SY17 297 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ANKRD20A8PQ5CZ79 823 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 INTS6LQ5JSJ4 861 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 KCNT1Q5JUK3 1230 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SPDYAQ5MJ70 313 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ZNF449Q6P9G9 518 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 CYP4V2Q6ZWL3 525 aaPredicted RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 PDZD4Q76G19 769 aaPredicted RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 PALM2Q8IXS6 379 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ADGRF2Q8IZF7 708 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PLD5Q8N7P1 536 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 KBTBD7Q8WVZ9 684 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 DNAJB3Q8WWF6 145 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 C9orf72Q96LT7 481 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PPP1R16BQ96T49 567 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PRMT1Q99873 361 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 DHRS4Q9BTZ2 278 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 SNRNP25Q9BV90 132 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 DUSP16Q9BY84 665 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 BRD8Q9H0E9 1235 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 NXF3Q9H4D5 531 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 VPS37BQ9H9H4 285 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 LRRC4CQ9HCJ2 640 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 XAB2Q9HCS7 855 aaKnown RBP8.59□□□□□ -1.03
SKA2-203ENST00000578105 TJP2Q9UDY2 1190 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PCSK1NQ9UHG2 260 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 ZNF180Q9UJW8 692 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 IPPQ9Y573 584 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 PTCH2Q9Y6C5 1203 aa8.59□□□□□ -1.03
SKA2-203ENST00000578105 H3BRJ5 948 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 H7C0C1 242 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 TNPO2O14787 897 aaKnown RBP8.58□□□□□ -1.04
SKA2-203ENST00000578105 NCAM2O15394 837 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 ST8SIA5O15466 376 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 TREHO43280 583 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 ADCY6O43306 1168 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 SNX3O60493 162 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 ZNF623O75123 536 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 F9P00740 461 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 VIMP08670 466 aaKnown RBP8.58□□□□□ -1.04
SKA2-203ENST00000578105 NPR3P17342 541 aa8.58□□□□□ -1.04
SKA2-203ENST00000578105 CNTFP26441 200 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms