RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RUNX3Q13761 415 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 DRAP1Q14919 205 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 UBXN2BQ14CS0 331 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 ANGPT1Q15389 498 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 PMF1Q6P1K2 205 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 KLHDC10Q6PID8 442 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 APTXQ7Z2E3 356 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 TADA2BQ86TJ2 420 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 HSFY1Q96LI6 401 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 NAA15Q9BXJ9 866 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 SIT1Q9Y3P8 196 aa23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 PTPRZ1P23471 2315 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-206ENST00000577990 TBX18O95935 607 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 PNMA6AP0CW24 399 aaPredicted RBP23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 ATP5C1P36542 298 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 YWHAGP61981 247 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 PTK2Q05397 1052 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 ZSCAN23Q3MJ62 389 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 DENND1BQ6P3S1 775 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 C1orf228Q6PIY5 440 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 FAM71AQ8IYT1 594 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 ZNF276Q8N554 614 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 FAM3CQ92520 227 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 CDK5RAP1Q96SZ6 601 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 NELL2Q99435 816 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 OSBPL6Q9BZF3 934 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 GANQ9H2C0 597 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 CNGB3Q9NQW8 809 aa23.3■■□□□ 1.32
SMARCD2-206ENST00000577990 FAM170BA6NMN3 283 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 SPECC1L-ADORA2AF8WAN1 911 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 GFRA3O60609 400 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 LCP1P13796 627 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 TARSP26639 723 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 CTHP32929 405 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 CLCN1P35523 988 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 GPD2P43304 727 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 KLK7P49862 253 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 UBXN1Q04323 297 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 IQCB1Q15051 598 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 EML3Q32P44 896 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 C10orf120Q5SQS8 335 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 BHLHA9Q7RTU4 235 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 RALGPS2Q86X27 583 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 SCML4Q8N228 414 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 CPA6Q8N4T0 437 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 NDRG1Q92597 394 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 ATP2A3Q93084 1043 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 FAM207AQ9NSI2 230 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 DNMT3LQ9UJW3 386 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 NUDT5Q9UKK9 219 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 SIK3Q9Y2K2 1263 aa23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 MTF2Q9Y483 593 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-206ENST00000577990 SLC9A3R1O14745 358 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 MDM4O15151 490 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 GABBR2O75899 941 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 BPIFB4P59827 614 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 SYCP1Q15431 976 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 KLF16Q9BXK1 252 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 STK33Q9BYT3 514 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 LINC00597Q9H2U6 94 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 DLGAP2Q9P1A6 1054 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 NDRG2Q9UN36 371 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 SH3BP1Q9Y3L3 701 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 DAAM1Q9Y4D1 1078 aa23.28■■□□□ 1.32
SMARCD2-206ENST00000577990 E2F8A0AVK6 867 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 OTOL1A6NHN0 477 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 PIK3R2O00459 728 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 IRF1P10914 325 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 NBL1P41271 181 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 RPL34P49207 117 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 DAOAP59103 153 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 GOLGA8FQ08AF8 430 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 GOLGA8DPQ0D2H9 430 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 SLC47A2Q86VL8 602 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 STK32AQ8WU08 396 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 PCMTD1Q96MG8 357 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 ERGIC2Q96RQ1 377 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 ECT2Q9H8V3 914 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 CBX8Q9HC52 389 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 ST7Q9NRC1 585 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 PCDHGC3Q9UN70 934 aa23.27■■□□□ 1.32
SMARCD2-206ENST00000577990 SPTBN4Q9H254 2564 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 F8VZ95 297 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 SCAMP3O14828 347 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 NCAM2O15394 837 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 FBXO21O94952 628 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 NFATC1O95644 943 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 CAVIN2O95810 425 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 POLR2FP61218 127 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 BTBD8Q5XKL5 378 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 TXNDC11Q6PKC3 985 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 RSRC2Q7L4I2 434 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 ASCL5Q7RTU5 278 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 ZNF687Q8N1G0 1237 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 IRGQQ8WZA9 623 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 TBC1D14Q9P2M4 693 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 RASAL2Q9UJF2 1139 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 FANCMQ8IYD8 2048 aa23.26■■□□□ 1.31
SMARCD2-206ENST00000577990 YJEFN3A6XGL0 299 aa23.25■■□□□ 1.31
SMARCD2-206ENST00000577990 E7ENQ6 273 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms