RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FOLH1Q04609 750 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 TAAR1Q96RJ0 339 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 EPAS1Q99814 870 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 RRN3Q9NYV6 651 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 LGALS13Q9UHV8 139 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 PSMD3O43242 534 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 BCL10O95999 233 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 C6orf222P0C671 652 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 ADRA2BP18089 450 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 MLH1P40692 756 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 CLK1P49759 484 aaKnown RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 EIF2B2P49770 351 aaKnown RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 PKNOX1P55347 436 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 MAMLD1Q13495 774 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 DENND1BQ6P3S1 775 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 USP33Q8TEY7 942 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 LRRC40Q9H9A6 602 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF839A8K0R7 811 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 H0YGN5 161 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 MAFGO15525 162 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 SERPINA6P08185 405 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 CA8P35219 290 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 ORC1Q13415 861 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 RUVBL2Q9Y230 463 aaKnown RBP13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 UBA6A0AVT1 1052 aaPredicted RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 F8W8V4 182 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 APOC4-APOC2K7ER74 178 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 EEF2KO00418 725 aaKnown RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 PEX1O43933 1283 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 APOC2P02655 101 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 UBAP2LQ14157 1087 aaKnown RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 IMPG1Q17R60 797 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 AGKQ53H12 422 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 VSTM1Q6UX27 236 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 PALB2Q86YC2 1186 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 FAR2Q96K12 515 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 STK32BQ9NY57 414 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 DFFAO00273 331 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 MYL4P12829 197 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 MYL6P60660 151 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 XIAPP98170 497 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 NRF1Q16656 503 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 RBM15BQ8NDT2 890 aaKnown RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 TSPAN14Q8NG11 270 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 RXFP2Q8WXD0 754 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 MRPS26Q9BYN8 205 aaKnown RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 CYLDQ9NQC7 956 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 HOXC10Q9NYD6 342 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 PACSIN3Q9UKS6 424 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 R3HDM2Q9Y2K5 976 aaKnown RBP13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.24
PCDHGB3-201ENST00000576222 PRR5-ARHGAP8B1AHC4 643 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 KCNK10P57789 538 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 ARHGAP8P85298 464 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 UCMAQ8WVF2 138 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 DLG3Q92796 817 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 SHMT1P34896 483 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 GP5P40197 560 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 CDK7P50613 346 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 HSD17B4P51659 736 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 DEFA1P59665 94 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 DEFA3P59666 94 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 FAM83EQ2M2I3 478 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC153Q494R4 210 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZSCAN18Q8TBC5 510 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 IFT43Q96FT9 208 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZC4H2Q9NQZ6 224 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP3A7-CYP3A51PA0A087WV96 503 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 A0A0B4J269 797 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 PEX11AO75192 247 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 TM7SF2O76062 418 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms