RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MDH1BQ5I0G3 518 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 FNBP1LQ5T0N5 605 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 SRRM1Q8IYB3 904 aaKnown RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 RIBC1Q8N443 379 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 PYROXD1Q8WU10 500 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 KCNK9Q9NPC2 374 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 POC1B-GALNT4F8VUJ3 575 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 MYO1CO00159 1063 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 SMAPO00193 183 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 KCNN4O15554 427 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 ADAMTS4O75173 837 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 BRAFP15056 766 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 IBSPP21815 317 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 CYP2F1P24903 491 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 L1CAMP32004 1257 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 MATKP42679 507 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 CACNB2Q08289 660 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 MTM1Q13496 603 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 MICALCLQ6ZW33 695 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 MGARPQ8TDB4 240 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 DYDC1Q8WWB3 177 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 NDRG1Q92597 394 aaKnown RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 PHACTR1Q9C0D0 580 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 AGO3Q9H9G7 860 aaKnown RBP14.62□□□□□ -0.07
VPS33B-208ENST00000574755 ZBED1O96006 694 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 SCNN1GP51170 649 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 MGAT3Q09327 533 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 LRRC14Q15048 493 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 MSS51Q4VC12 460 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 VSTM1Q6UX27 236 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 DSTYKQ6XUX3 929 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 CLEC20AQ6ZU45 233 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 PAQR9Q6ZVX9 377 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 STRADAQ7RTN6 431 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 DEFB106AQ8N104 65 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 FAF2Q96CS3 445 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 NRDE2Q9H7Z3 1164 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 LRRC4Q9HBW1 653 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 MIOSQ9NXC5 875 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 TIMM13Q9Y5L4 95 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-208ENST00000574755 CASTOR2A6NHX0 329 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 ZNF487B1APH4 448 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 RASA4BC9J798 803 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 RASA4O43374 803 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 RPLP2P05387 115 aaKnown RBP14.61□□□□□ -0.07
VPS33B-208ENST00000574755 FAM163BP0C2L3 166 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 RBL1P28749 1068 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 SULT1E1P49888 294 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 MAP3K7CLP57077 242 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 ADCY1Q08828 1119 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 KCNA10Q16322 511 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 SYCP2LQ5T4T6 812 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 KIAA0319Q5VV43 1072 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 AGMOQ6ZNB7 445 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 SIX6OS1Q8N1H7 587 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 ANKRD42Q8N9B4 389 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 RNF169Q8NCN4 708 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 C3orf58Q8NDZ4 430 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 USP29Q9HBJ7 922 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 KRT82Q9NSB4 513 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 GIT1Q9Y2X7 761 aa14.61□□□□□ -0.07
VPS33B-208ENST00000574755 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CAPN15O75808 1086 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 FAM200BP0CF97 657 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 GCAP28676 217 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CCND3P30281 292 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CD52P31358 61 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 PHBP35232 272 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 LHX1P48742 406 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 YWHAZP63104 245 aaKnown RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 MRPS5P82675 430 aaKnown RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 RNASELQ05823 741 aaKnown RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 SLC25A52Q3SY17 297 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 BBS9Q3SYG4 887 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 FAM182AQ5T1J6 154 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 GKAP1Q5VSY0 366 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 TADA2BQ86TJ2 420 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 RPAINQ86UA6 219 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 TAX1BP1Q86VP1 789 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 FAM131BQ86XD5 332 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 TMEM86AQ8N2M4 240 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 ATP11CQ8NB49 1132 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 FBXO36Q8NEA4 188 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 ZNF317Q96PQ6 595 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 MAGEB5Q9BZ81 275 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 OSBPL7Q9BZF2 842 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 UBN1Q9NPG3 1134 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 RAB6BQ9NRW1 208 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 PAK5Q9P286 719 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 DDX20Q9UHI6 824 aaKnown RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 PADI3Q9ULW8 664 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 HTTP42858 3142 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 C5orf60A6NFR6 353 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 E7ESA3 106 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms