RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 SEPT11Q9NVA2 429 aaKnown RBP34.72■■■■□ 3.15
CTDNEP1-209ENST00000574205 MUTYHQ9UIF7 546 aa34.72■■■■□ 3.15
CTDNEP1-209ENST00000574205 BZW2Q9Y6E2 419 aaKnown RBP34.72■■■■□ 3.15
CTDNEP1-209ENST00000574205 UNGP13051 313 aaPredicted RBP34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 PSMC3P17980 439 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 TMC6Q7Z403 805 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 MFSD6LQ8IWD5 586 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 PCDHB18PQ96TA0 734 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 CPQQ9Y646 472 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 LTFP02788 710 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 ERBB2P04626 1255 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 BPIFB1Q8TDL5 484 aa34.71■■■■□ 3.15
CTDNEP1-209ENST00000574205 TBX18O95935 607 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 TCF3P15923 654 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 TNFAIP3P21580 790 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 GABRB2P47870 512 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 CENPCQ03188 943 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 CLEC16AQ2KHT3 1053 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 C10orf120Q5SQS8 335 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 HFE2Q6ZVN8 426 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 RSRC2Q7L4I2 434 aaKnown RBP34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 ZDHHC17Q8IUH5 632 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 C18orf8Q96DM3 657 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 DNMT3LQ9UJW3 386 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 NUDT5Q9UKK9 219 aa34.7■■■■□ 3.14
CTDNEP1-209ENST00000574205 SKILP12757 684 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 HNRNPH3P31942 346 aaKnown RBP34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 HGSNATQ68CP4 663 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 ZNF571Q7Z3V5 609 aaPredicted RBP34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 OR8K1Q8NGG5 319 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 FAM149B1Q96BN6 582 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 LRRC3BQ96PB8 259 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 TRIM62Q9BVG3 475 aa34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 OLA1Q9NTK5 396 aaKnown RBP34.69■■■■□ 3.14
CTDNEP1-209ENST00000574205 SERPING1P05155 500 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 NSFP46459 744 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 ZXDBP98169 803 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 FCHO2Q0JRZ9 810 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 TBX2Q13207 712 aaPredicted RBP34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 ARID5BQ14865 1188 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 TDRD12Q587J7 1177 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 OLIG1Q8TAK6 271 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 SH3RF2Q8TEC5 729 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 ZFRQ96KR1 1074 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 DNAJC7Q99615 494 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 TRMT61BQ9BVS5 477 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 SMPD4Q9NXE4 827 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 DUSP12Q9UNI6 340 aa34.68■■■■□ 3.14
CTDNEP1-209ENST00000574205 MFAP3LO75121 409 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 MMP8P22894 467 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 USP4Q13107 963 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 GRM2Q14416 872 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 ZNF77Q15935 545 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 OR6B2Q6IFH4 312 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 OLFML1Q6UWY5 402 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 TOGARAM2Q6ZUX3 1019 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 FAM183BPQ6ZVS7 135 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 DDX42Q86XP3 938 aaKnown RBP eCLIP34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 RNF139Q8WU17 664 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 EDEM1Q92611 657 aa34.67■■■■□ 3.14
CTDNEP1-209ENST00000574205 GLI1P08151 1106 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 SRFP11831 508 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 EFHC1Q5JVL4 640 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 BEND5Q7L4P6 421 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 CNGA4Q8IV77 575 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 UBALD2Q8IYN6 164 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 SLC30A5Q8TAD4 765 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 PIWIL1Q96J94 861 aaKnown RBP34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 ASNSD1Q9NWL6 643 aa34.66■■■■□ 3.14
CTDNEP1-209ENST00000574205 FAM170AA1A519 330 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 LEFTY2O00292 366 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 YWHAZP63104 245 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 SLC6A3Q01959 620 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 YAF2Q8IY57 180 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 DRC7Q8IY82 874 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 RIN3Q8TB24 985 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 POPDC2Q9HBU9 364 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 ABHD10Q9NUJ1 306 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 KIF26AQ9ULI4 1882 aaPredicted RBP34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 MDM4O15151 490 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 MTF1Q14872 753 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 PPP1R2P3Q6NXS1 205 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 XYLT1Q86Y38 959 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 PHF13Q86YI8 300 aaPredicted RBP34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 THG1LQ9NWX6 298 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 RASAL2Q9UJF2 1139 aa34.65■■■■□ 3.14
CTDNEP1-209ENST00000574205 DCXO43602 365 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 NARSO43776 548 aaKnown RBP34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 FYNP06241 537 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 NCAM1P13591 858 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 SCNN1AP37088 669 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 EFEMP1Q12805 493 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 TSR1Q2NL82 804 aaKnown RBP34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 C2CD6Q53TS8 623 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 MMS22LQ6ZRQ5 1243 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 SLC26A9Q7LBE3 791 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 MIB1Q86YT6 1006 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 KIAA1958Q8N8K9 716 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 TTC16Q8NEE8 873 aa34.64■■■■□ 3.14
CTDNEP1-209ENST00000574205 KLF16Q9BXK1 252 aaPredicted RBP34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms