RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CCDC26Q8TAB7 109 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 ACDQ96AP0 544 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 SRRTQ9BXP5 876 aaKnown RBP27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 UBXN6Q9BZV1 441 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 SPHK2Q9NRA0 654 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 DNMT3LQ9UJW3 386 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 TSPAN16Q9UKR8 245 aa27.41■■□□□ 1.98
NPLOC4-215ENST00000574095 TULP2O00295 520 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 GREM1O60565 184 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 KAT7O95251 611 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 TBXAS1P24557 533 aaPredicted RBP27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 EIF2DP41214 584 aaKnown RBP27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 KDSRQ06136 332 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 ANO4Q32M45 955 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 SGO2Q562F6 1265 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 NT5C1BQ96P26 610 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 ARHGEF4Q9NR80 690 aa27.4■■□□□ 1.98
NPLOC4-215ENST00000574095 CCDC163A0A0D9SF12 145 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 PMM2O15305 246 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 APODP05090 189 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 RALAP11233 206 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 PLA2G4AP47712 749 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 SLC8A3P57103 927 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 PDE4CQ08493 712 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 GOLGA8FQ08AF8 430 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 GOLGA8DPQ0D2H9 430 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 SPEM2Q0P670 501 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 RAB41Q5JT25 222 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 KLHDC10Q6PID8 442 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 CCDC33Q8N5R6 958 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 KAT5Q92993 513 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 KIAA1468Q9P260 1216 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 LSM7Q9UK45 103 aaKnown RBP27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 USP18Q9UMW8 372 aa27.39■■□□□ 1.98
NPLOC4-215ENST00000574095 VDRP11473 427 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 TGM1P22735 817 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 TKTL1P51854 596 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 CETN1Q12798 172 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 EMC10Q5UCC4 262 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 BTBD8Q5XKL5 378 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 TMEM270Q6UE05 265 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 MIB1Q86YT6 1006 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 TRIM59Q8IWR1 403 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 PPM1KQ8N3J5 372 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 ZNF276Q8N554 614 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 GPR161Q8N6U8 529 aaKnown RBP27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 LMO3Q8TAP4 145 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 UBA3Q8TBC4 463 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 GAB3Q8WWW8 586 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 RMDN1Q96DB5 314 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 PARD6AQ9NPB6 346 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 CLIC5Q9NZA1 410 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 PCDHB4Q9Y5E5 795 aa27.38■■□□□ 1.97
NPLOC4-215ENST00000574095 DCHS1Q96JQ0 3298 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 A0A0A0MRY4 1105 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 AXIN1O15169 862 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 HOXC11O43248 304 aaPredicted RBP27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 RPP40O75818 363 aaKnown RBP27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 APBB3O95704 486 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 GNA14O95837 355 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 RETP07949 1114 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 CCDC192P0DO97 292 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 GRIA2P42262 883 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 KCNH2Q12809 1159 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 TADA2BQ86TJ2 420 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 ETFBKMTQ8IXQ9 262 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 PHTF2Q8N3S3 785 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 FAM160A2Q8N612 972 aaPredicted RBP27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 TRIML1Q8N9V2 468 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 NDRG1Q92597 394 aaKnown RBP27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 HESX1Q9UBX0 185 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 RASAL2Q9UJF2 1139 aa27.37■■□□□ 1.97
NPLOC4-215ENST00000574095 RALGAPA1Q6GYQ0 2036 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 RNF225M0QZC1 329 aaPredicted RBP27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 XPO1O14980 1071 aaKnown RBP27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 P4HA2O15460 535 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 TULP3O75386 442 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 TIE1P35590 1138 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 BCAT1P54687 386 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 MRPS21P82921 87 aaKnown RBP27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 EFEMP1Q12805 493 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 TPGS1Q6ZTW0 290 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 RRAGAQ7L523 313 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 EHBP1Q8NDI1 1231 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 ULBP1Q9BZM6 244 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 ZDHHC4Q9NPG8 344 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 KIAA1257Q9ULG3 409 aa27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.36■■□□□ 1.97
NPLOC4-215ENST00000574095 O00370 1275 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 TRIM24O15164 1050 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 MARSP56192 900 aaKnown RBP27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 YWHAGP61981 247 aaKnown RBP eCLIP27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 BST2Q10589 180 aaKnown RBP27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 ARHGEF19Q8IW93 802 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 ARHGAP18Q8N392 663 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 ALLCQ8N6M5 410 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 TSTD1Q8NFU3 115 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 TFAP2BQ92481 460 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms