RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 SEMA5AQ13591 1074 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 BMPR2Q13873 1038 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 E2F2Q14209 437 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 CNGA2Q16280 664 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 ZNF618Q5T7W0 954 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 DARS2Q6PI48 645 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 CLEC17AQ6ZS10 378 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 RD3Q7Z3Z2 195 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 DGKHQ86XP1 1220 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 HSCBQ8IWL3 235 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 MPP5Q8N3R9 675 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 BOLLQ8N9W6 283 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 OR56A3Q8NH54 315 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 NMD3Q96D46 503 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 APIPQ96GX9 242 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 CDK19Q9BWU1 502 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 API5Q9BZZ5 524 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 POLKQ9UBT6 870 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 AFF4Q9UHB7 1163 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 PAXBP1Q9Y5B6 917 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 COX11Q9Y6N1 276 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 PXDNLA1KZ92 1463 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 SOS1Q07889 1333 aaPredicted RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 SLIT1O75093 1534 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 XRN1Q8IZH2 1706 aaKnown RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 PHRF1Q9P1Y6 1649 aaKnown RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 PTPRUQ92729 1446 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 ATP10DQ9P241 1426 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 TLR5O60602 858 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 NXPH3O95157 252 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 IGLV2-14P01704 120 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 IL6RP08887 468 aaPredicted RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 JUPP14923 745 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 WT1P19544 449 aaPredicted RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 KCNA3P22001 575 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 PRKAR2BP31323 418 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 LIPAP38571 399 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 CLCN2P51788 898 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 DGKEP52429 567 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 ATXN1P54253 815 aaKnown RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 FMO1Q01740 532 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 MGAT5BQ3V5L5 792 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 SLC44A4Q53GD3 710 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 PLA1AQ53H76 456 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 TMEM57Q8N5G2 664 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 RAPGEF4Q8WZA2 1011 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 LRRC27Q9C0I9 530 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 A1CFQ9NQ94 594 aaKnown RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 SACM1LQ9NTJ5 587 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 SERTAD4Q9NUC0 356 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 ASB6Q9NWX5 421 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 COL20A1Q9P218 1284 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 ARPP21Q9UBL0 812 aaPredicted RBP5.67□□□□□ -1.5
CDC27-215ENST00000573550 PEAK1Q9H792 1746 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 PTPRCP08575 1304 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 TTC21BQ7Z4L5 1316 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 KDRP35968 1356 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 PLEKHG1Q9ULL1 1385 aa5.67□□□□□ -1.5
CDC27-215ENST00000573550 RGS12O14924 1447 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 USP6P35125 1406 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 SSH2Q76I76 1423 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 LMTK3Q96Q04 1460 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ARHGAP23Q9P227 1491 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 MBD3L4A6NDZ8 208 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 MBD3L3A6NE82 208 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 GCOM1H8Y6P7 765 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 SLC16A3O15427 465 aaKnown RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 TTLL1O95922 423 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ELLP55199 621 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 KRT17Q04695 432 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 TSTD2Q5T7W7 516 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ZDHHC24Q6UX98 284 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ZNF551Q7Z340 670 aaPredicted RBP5.66□□□□□ -1.5
CDC27-215ENST00000573550 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ARHGEF25Q86VW2 580 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 SLC15A3Q8IY34 581 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 SARAFQ96BY9 339 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 DDX21Q9NR30 783 aaKnown RBP eCLIP5.66□□□□□ -1.5
CDC27-215ENST00000573550 ST3GAL5Q9UNP4 418 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 TNNQ9UQP3 1299 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 SPATA31A6Q5VVP1 1343 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 TMEM2Q9UHN6 1383 aa5.66□□□□□ -1.5
CDC27-215ENST00000573550 ADAMTS13Q76LX8 1427 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 ANKARQ7Z5J8 1434 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 LRRC3CA6NJW4 275 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PYCARD-AS1I3L0S3 204 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 MGEA5O60502 916 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PPFIA2O75334 1257 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 EBLN1P0CF75 366 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 DRD4P21917 467 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 KLRC1P26715 233 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PDE6CP51160 858 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 RPS16P62249 146 aaKnown RBP5.65□□□□□ -1.5
CDC27-215ENST00000573550 SATB1Q01826 763 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PLAC9Q5JTB6 97 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms