RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 C12orf40Q86WS4 652 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 ABCA7Q8IZY2 2146 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 C12orf50Q8NA57 414 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 USP33Q8TEY7 942 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 TATDN2Q93075 761 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 TMEM176AQ96HP8 235 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 DUSP16Q9BY84 665 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 TPSD1Q9BZJ3 242 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 ARRDC1-AS1Q9H2J1 176 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 SPHK2Q9NRA0 654 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 NUDT5Q9UKK9 219 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 MMP17Q9ULZ9 603 aa10.17□□□□□ -0.78
NPLOC4-212ENST00000573328 LAMA1P25391 3075 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 TBC1D3BA6NDS4 549 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 HHLA1C9JL84 531 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 NEDD8-MDP1E9PL57 170 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 ALDH1A2O94788 518 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 KLF8O95600 359 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 RALAP11233 206 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CD19P15391 556 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 KCNA4P22459 653 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 PPP1R2P41236 205 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 GRIA2P42262 883 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 PGFP49763 221 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 PSEN1P49768 467 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 KIF11P52732 1056 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 MRPS21P82921 87 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 LRMPQ12912 555 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CUL2Q13617 745 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CCDC6Q16204 474 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CSRP2Q16527 193 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 GOLGA7BQ2TAP0 167 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 TPGS1Q6ZTW0 290 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 RSRC2Q7L4I2 434 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 MIB1Q86YT6 1006 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 SFTPA1Q8IWL2 248 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 ALLCQ8N6M5 410 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 SLC4A11Q8NBS3 891 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 TXNDC5Q8NBS9 432 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 WBP2Q969T9 261 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 FAXDC2Q96IV6 333 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 XPO6Q96QU8 1125 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CDK5RAP1Q96SZ6 601 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 NMUR1Q9HB89 426 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 METTL14Q9HCE5 456 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 POLMQ9NP87 494 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 OSER1Q9NX31 292 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 DLL3Q9NYJ7 618 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 DEC1Q9P2X7 70 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 HESX1Q9UBX0 185 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 DNMT3LQ9UJW3 386 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 MAN1B1Q9UKM7 699 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CTNND2Q9UQB3 1225 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 INVSQ9Y283 1065 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 CACNA1AO00555 2505 aa10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 TNRC6BQ9UPQ9 1833 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-212ENST00000573328 BICDL2A1A5D9 508 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 ANTXRLA6NF34 631 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 BIN1O00499 593 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 HOXC11O43248 304 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 TULP3O75386 442 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 EPN2O95208 641 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 HMBSP08397 361 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 TGM1P22735 817 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 TBXAS1P24557 533 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 BCAT1P54687 386 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 RAD23BP54727 409 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 MESP2Q0VG99 397 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 CETN1Q12798 172 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 EFEMP1Q12805 493 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 USP39Q53GS9 565 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 SGO2Q562F6 1265 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 EOGTQ5NDL2 527 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 C10orf76Q5T2E6 689 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 CCDC186Q7Z3E2 898 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 TRMT11Q7Z4G4 463 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 TMEM25Q86YD3 366 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 ZC3H3Q8IXZ2 948 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 PGBD3Q8N328 593 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 ZNF513Q8N8E2 541 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 NETO1Q8TDF5 533 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 NELFBQ8WX92 580 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 BHMTQ93088 406 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 SLC35C1Q96A29 364 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 DHTKD1Q96HY7 919 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 RTKNQ9BST9 563 aa10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-212ENST00000573328 FAM124BQ9H5Z6 455 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms