RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 HTR3DQ70Z44 454 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 BBS7Q8IWZ6 715 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 KCTD13Q8WZ19 329 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 CD101Q93033 1021 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 NKD2Q969F2 451 aaPredicted RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 ULBP1Q9BZM6 244 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 NACA2Q9H009 215 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 SEMA4AQ9H3S1 761 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 NUDT5Q9UKK9 219 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 SH3BP1Q9Y3L3 701 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 WDR87Q6ZQQ6 2873 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 OTOGLQ3ZCN5 2332 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 K7ESF4 209 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 MDM4O15151 490 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 GFRA3O60609 400 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 LILRB5O75023 590 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 GABBR2O75899 941 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 ZBED1O96006 694 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 CXCL12P48061 93 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 MAN2A1Q16706 1144 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 EXOC3L4Q17RC7 722 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 MIIPQ5JXC2 388 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 C10orf120Q5SQS8 335 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 GJB7Q6PEY0 223 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 ENOSF1Q7L5Y1 443 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 SCML4Q8N228 414 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 ARHGAP18Q8N392 663 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 SLC35F5Q8WV83 523 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 EXOC4Q96A65 974 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 CDK5RAP1Q96SZ6 601 aaKnown RBP16.96■□□□□ 0.31
NDE1-205ENST00000572756 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
NDE1-205ENST00000572756 ZSCAN32Q9NX65 697 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 DNMT3LQ9UJW3 386 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
NDE1-205ENST00000572756 PTPRZ1P23471 2315 aaPredicted RBP16.96■□□□□ 0.3
NDE1-205ENST00000572756 CHURC1-FNTBB4DL54 471 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 IRF1P10914 325 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 RALAP11233 206 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 PON1P27169 355 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 EIF2DP41214 584 aaKnown RBP16.95■□□□□ 0.3
NDE1-205ENST00000572756 YWHAGP61981 247 aaKnown RBP eCLIP16.95■□□□□ 0.3
NDE1-205ENST00000572756 APBA1Q02410 837 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 PPP2R5DQ14738 602 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 FBXO43Q4G163 708 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 LY6G5CQ5SRR4 150 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 PMF1Q6P1K2 205 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 Q6ZNB5 142 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 NDRG1Q92597 394 aaKnown RBP16.95■□□□□ 0.3
NDE1-205ENST00000572756 FAM81BQ96LP2 452 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 SIX2Q9NPC8 291 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
NDE1-205ENST00000572756 APEX2Q9UBZ4 518 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 GPR179Q6PRD1 2367 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 GVINP1Q7Z2Y8 2422 aa16.95■□□□□ 0.3
NDE1-205ENST00000572756 MYO18AQ92614 2054 aaKnown RBP16.94■□□□□ 0.3
NDE1-205ENST00000572756 EP300Q09472 2414 aaPredicted RBP16.94■□□□□ 0.3
NDE1-205ENST00000572756 BECN2A8MW95 431 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 M0QYV0 167 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 HOXC11O43248 304 aaPredicted RBP16.94■□□□□ 0.3
NDE1-205ENST00000572756 RNF40O75150 1001 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 STC2O76061 302 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 ADH1CP00326 375 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 ADH5P11766 374 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 HOXA6P31267 233 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 MFAP3P55082 362 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 SMYD5Q6GMV2 418 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 DPY19L2P1Q6NXN4 242 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 C12orf40Q86WS4 652 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 ENOX1Q8TC92 643 aaKnown RBP16.94■□□□□ 0.3
NDE1-205ENST00000572756 SECISBP2LQ93073 1101 aaKnown RBP16.94■□□□□ 0.3
NDE1-205ENST00000572756 TUBGCP2Q9BSJ2 902 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 NDST4Q9H3R1 872 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 CNGB3Q9NQW8 809 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 SPHK2Q9NRA0 654 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 FRYLO94915 3013 aa16.94■□□□□ 0.3
NDE1-205ENST00000572756 KCNJ18B7U540 433 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
NDE1-205ENST00000572756 KRT5P13647 590 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 SLC6A11P48066 632 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 NRLP54845 237 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 DAOAP59103 153 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 GOLGA8FQ08AF8 430 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 GOLGA8DPQ0D2H9 430 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 MESP2Q0VG99 397 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 KCNJ12Q14500 433 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 MEA1Q16626 185 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 TMEM25Q86YD3 366 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 ETFBKMTQ8IXQ9 262 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 PHTF2Q8N3S3 785 aa16.93■□□□□ 0.3
NDE1-205ENST00000572756 SHC3Q92529 594 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms