RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TOGARAM2Q6ZUX3 1019 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 FAM35AQ86V20 835 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 MDM1Q8TC05 714 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 CGRRF1Q99675 332 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 MED10Q9BTT4 135 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 TRIM9Q9C026 710 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 CCDC86Q9H6F5 360 aaKnown RBP21.04■□□□□ 0.96
CCDC40-206ENST00000572083 CACNA2D2Q9NY47 1150 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 SUSD2Q9UGT4 822 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 PRRT4C9JH25 899 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 HOXD13P35453 343 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 PGFP49763 221 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 TUBP50607 506 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 CEBPZQ03701 1054 aaKnown RBP21.03■□□□□ 0.96
CCDC40-206ENST00000572083 C8orf34Q49A92 452 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 SYCP2LQ5T4T6 812 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 SNX30Q5VWJ9 437 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 KIAA1324Q6UXG2 1013 aaKnown RBP21.03■□□□□ 0.96
CCDC40-206ENST00000572083 CCNI2Q6ZMN8 369 aaPredicted RBP21.03■□□□□ 0.96
CCDC40-206ENST00000572083 CCDC65Q8IXS2 484 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 SCFD1Q8WVM8 642 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 CCDC127Q96BQ5 260 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 ZNF419Q96HQ0 510 aaPredicted RBP21.03■□□□□ 0.96
CCDC40-206ENST00000572083 MRGPRX1Q96LB2 322 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 GABRG3Q99928 467 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 BBS2Q9BXC9 721 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 FAM124BQ9H5Z6 455 aaPredicted RBP21.03■□□□□ 0.96
CCDC40-206ENST00000572083 SMYD3Q9H7B4 428 aa21.03■□□□□ 0.96
CCDC40-206ENST00000572083 PLXNB3Q9ULL4 1909 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 CACNG3O60359 315 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 TYRP14679 529 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 GNSP15586 552 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 MYL6P60660 151 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 TPGS1Q6ZTW0 290 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 STXBP4Q6ZWJ1 553 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 XPO6Q96QU8 1125 aaKnown RBP21.02■□□□□ 0.96
CCDC40-206ENST00000572083 DUSP9Q99956 384 aaKnown RBP21.02■□□□□ 0.96
CCDC40-206ENST00000572083 KIAA1586Q9HCI6 787 aa21.02■□□□□ 0.96
CCDC40-206ENST00000572083 DMAP1Q9NPF5 467 aaPredicted RBP21.02■□□□□ 0.96
CCDC40-206ENST00000572083 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.02■□□□□ 0.96
CCDC40-206ENST00000572083 ATP8B3O60423 1300 aa21.02■□□□□ 0.95
CCDC40-206ENST00000572083 WASH3PC4AMC7 463 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 GREM1O60565 184 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 TLR5O60602 858 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 CLSTN1O94985 981 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 ZDHHC11BP0C7U3 371 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 CYP2J2P51589 502 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 CDH8P55286 799 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 CYP24A1Q07973 514 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 TRPC3Q13507 836 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 WDR45BQ5MNZ6 344 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 FAM173BQ6P4H8 233 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 PAQR9Q6ZVX9 377 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 SLCO6A1Q86UG4 719 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 PDILTQ8N807 584 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 FOXJ1Q92949 421 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 BHMTQ93088 406 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 XYLT2Q9H1B5 865 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 KRT82Q9NSB4 513 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 IL37Q9NZH6 218 aa21.01■□□□□ 0.95
CCDC40-206ENST00000572083 APOBEC2Q9Y235 224 aaKnown RBP21.01■□□□□ 0.95
CCDC40-206ENST00000572083 MEI4A8MW99 385 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 CLIC2O15247 247 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 AP1G2O75843 785 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 TBX18O95935 607 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 FAM163BP0C2L3 166 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 PSMD6Q15008 389 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 SCARA5Q6ZMJ2 495 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 ZCCHC9Q8N567 271 aaKnown RBP21■□□□□ 0.95
CCDC40-206ENST00000572083 HNRNPLLQ8WVV9 542 aaKnown RBP21■□□□□ 0.95
CCDC40-206ENST00000572083 ZNF516Q92618 1163 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 ELMO3Q96BJ8 720 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 SMARCD1Q96GM5 515 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 AGPAT3Q9NRZ7 376 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 PCOLCE2Q9UKZ9 415 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 RAXQ9Y2V3 346 aa21■□□□□ 0.95
CCDC40-206ENST00000572083 BPTFQ12830 3046 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 FAM92AA1XBS5 289 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 CBFA2T3O75081 653 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 CD6P30203 668 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 DGKGP49619 791 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 HTR3DQ70Z44 454 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 GZF1Q9H116 711 aaPredicted RBP20.99■□□□□ 0.95
CCDC40-206ENST00000572083 IL21RQ9HBE5 538 aa20.99■□□□□ 0.95
CCDC40-206ENST00000572083 APC2O95996 2303 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 PTPRBP23467 1997 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 EIF3DO15371 548 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 TGFB1I1O43294 461 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 STAU1O95793 577 aaKnown RBP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 CCDC130P13994 396 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 FUKQ8N0W3 1084 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 ZMIZ2Q8NF64 920 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 SETD7Q8WTS6 366 aaKnown RBP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 SYAP1Q96A49 352 aaPredicted RBP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 TOE1Q96GM8 510 aaKnown RBP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 SMOQ99835 787 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 GPR174Q9BXC1 333 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 KLF16Q9BXK1 252 aaPredicted RBP20.98■□□□□ 0.95
CCDC40-206ENST00000572083 ZDHHC5Q9C0B5 715 aa20.98■□□□□ 0.95
CCDC40-206ENST00000572083 MIR1-1HGQ9H1L0 117 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms