RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 KRT14P02533 472 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 NUDT17P0C025 328 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 TKTP29401 623 aaKnown RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 ADCY8P40145 1251 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 ARSEP51690 589 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 PLCB3Q01970 1234 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 BTG3Q14201 252 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 PDK2Q15119 407 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 TAF5Q15542 800 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 OASLQ15646 514 aaKnown RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 C15orf59Q2T9L4 293 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 TTMPQ5BVD1 217 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 CEP85LQ5SZL2 805 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 CYP4V2Q6ZWL3 525 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 GSTA5Q7RTV2 222 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 ALLCQ8N6M5 410 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 PEBP4Q96S96 227 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 TMEM175Q9BSA9 504 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 TMBIM4Q9HC24 238 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 DDX43Q9NXZ2 648 aaKnown RBP18.08■□□□□ 0.49
RPAIN-208ENST00000571043 CACNG4Q9UBN1 327 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 ZNF148Q9UQR1 794 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 NDC80O14777 642 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 TP73O15350 636 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 CST8O60676 142 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 NPR3P17342 541 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 MLLT1Q03111 559 aaPredicted RBP18.08■□□□□ 0.48
RPAIN-208ENST00000571043 EFHC1Q5JVL4 640 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 SH3PXD2AQ5TCZ1 1133 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 MAP7D3Q8IWC1 876 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 SP7Q8TDD2 431 aaPredicted RBP18.08■□□□□ 0.48
RPAIN-208ENST00000571043 FAM172AQ8WUF8 416 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 HSPH1Q92598 858 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 CENPIQ92674 756 aaPredicted RBP18.08■□□□□ 0.48
RPAIN-208ENST00000571043 CFAP57Q96MR6 1250 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 FAM118BQ9BPY3 351 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 C11orf84Q9BUA3 381 aaPredicted RBP18.08■□□□□ 0.48
RPAIN-208ENST00000571043 B3GNT5Q9BYG0 378 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 FOXP3Q9BZS1 431 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 HCSTQ9UBK5 93 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
RPAIN-208ENST00000571043 GBF1Q92538 1859 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 ZNF487B1APH4 448 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 HMGB1P1B2RPK0 211 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 TMEM189-UBE2V1I3L0A0 370 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 NRP1O14786 923 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 TLL1O43897 1013 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 ATP2C2O75185 946 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 GALTP07902 379 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 MYZAPP0CAP1 466 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 LCP1P13796 627 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 IGFBP6P24592 240 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 ITGA8P53708 1063 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 ZNF844Q08AG5 666 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 TFDP2Q14188 446 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 TRIP13Q15645 432 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 CD300LGQ6UXG3 332 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 PAQR9Q6ZVX9 377 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 TRMT10CQ7L0Y3 403 aaKnown RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 PIGZQ86VD9 579 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 RFX6Q8HWS3 928 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 DDX23Q9BUQ8 820 aaKnown RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 EPB41L4BQ9H329 900 aa18.07■□□□□ 0.48
RPAIN-208ENST00000571043 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.07■□□□□ 0.48
RPAIN-208ENST00000571043 LAMA3Q16787 3333 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 APOC4-APOC2K7ER74 178 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 MDM4O15151 490 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 B3GAT3O94766 335 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 APOC2P02655 101 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 CD48P09326 243 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 ODC1P11926 461 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 ACAT1P24752 427 aaKnown RBP18.06■□□□□ 0.48
RPAIN-208ENST00000571043 PCSK1P29120 753 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 OR1G1P47890 313 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 SLC11A1P49279 550 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 CDH6P55285 790 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 BCAR1P56945 870 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 ATP11AP98196 1134 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 OTUD4Q01804 1114 aaKnown RBP18.06■□□□□ 0.48
RPAIN-208ENST00000571043 CDO1Q16878 200 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 MDH1BQ5I0G3 518 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 KIAA0319Q5VV43 1072 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 DENND2CQ68D51 928 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 CEP128Q6ZU80 1094 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 ACTL9Q8TC94 416 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 ATP6V1G3Q96LB4 118 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 MAK16Q9BXY0 300 aaKnown RBP18.06■□□□□ 0.48
RPAIN-208ENST00000571043 NGRNQ9NPE2 291 aaKnown RBP18.06■□□□□ 0.48
RPAIN-208ENST00000571043 DSEQ9UL01 958 aa18.06■□□□□ 0.48
RPAIN-208ENST00000571043 MRPL42Q9Y6G3 142 aaKnown RBP18.06■□□□□ 0.48
RPAIN-208ENST00000571043 CYP11A1P05108 521 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
RPAIN-208ENST00000571043 ALDH7A1P49419 539 aaKnown RBP18.05■□□□□ 0.48
RPAIN-208ENST00000571043 HDAC4P56524 1084 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms