RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 KCTD13Q8WZ19 329 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 EZH1Q92800 747 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-220ENST00000569916 OTUB2Q96DC9 234 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 ULBP1Q9BZM6 244 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 UBE2TQ9NPD8 197 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-220ENST00000569916 C2orf42Q9NWW7 574 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 ATG2BQ96BY7 2078 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 PRR23AA6NEV1 266 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 M0QYV0 167 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 PAPSS2O95340 614 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 MBD3O95983 291 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ZBED1O96006 694 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 DRD1P21728 446 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 PON1P27169 355 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 CXCL12P48061 93 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 YWHAGP61981 247 aaKnown RBP eCLIP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ADIGQ0VDE8 80 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 EXOC3L4Q17RC7 722 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 RHBDF2Q6PJF5 856 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ZC3H14Q6PJT7 736 aaKnown RBP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ARHGAP18Q8N392 663 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 ZBTB44Q8NCP5 570 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 SLC35F5Q8WV83 523 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 EXOC4Q96A65 974 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 SIX2Q9NPC8 291 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 APEX2Q9UBZ4 518 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
CNOT1-220ENST00000569916 AJAP1Q9UKB5 411 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-220ENST00000569916 VPS13AQ96RL7 3174 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 BECN2A8MW95 431 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 K7ESF4 209 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 GFRA3O60609 400 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 RNF40O75150 1001 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 GABBR2O75899 941 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 ADH1CP00326 375 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 RALAP11233 206 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 ADH5P11766 374 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 KRT5P13647 590 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-220ENST00000569916 MFAP3P55082 362 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 GOLGA8FQ08AF8 430 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 GOLGA8DPQ0D2H9 430 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 TADA2BQ86TJ2 420 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 SCML4Q8N228 414 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
CNOT1-220ENST00000569916 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
CNOT1-220ENST00000569916 NKD2Q969F2 451 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-220ENST00000569916 FAM81BQ96LP2 452 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 CDK5RAP1Q96SZ6 601 aaKnown RBP13.68□□□□□ -0.22
CNOT1-220ENST00000569916 ZSCAN32Q9NX65 697 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 NFE2L3Q9Y4A8 694 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 PCDHGA2Q9Y5H1 932 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 EML5Q05BV3 1969 aa13.68□□□□□ -0.22
CNOT1-220ENST00000569916 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 LILRB5O75023 590 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 STC2O76061 302 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 EIF2DP41214 584 aaKnown RBP13.67□□□□□ -0.22
CNOT1-220ENST00000569916 RGS7P49802 495 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 DAOAP59103 153 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 EFEMP1Q12805 493 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 ARHGAP44Q17R89 818 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 DPY19L2P1Q6NXN4 242 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 Q6ZNB5 142 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-220ENST00000569916 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 SHC3Q92529 594 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-220ENST00000569916 SEMA4AQ9H3S1 761 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 ACP6Q9NPH0 428 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 CNGB3Q9NQW8 809 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 SPHK2Q9NRA0 654 aa13.67□□□□□ -0.22
CNOT1-220ENST00000569916 LSM7Q9UK45 103 aaKnown RBP13.67□□□□□ -0.22
CNOT1-220ENST00000569916 YJEFN3A6XGL0 299 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 E7ENQ6 273 aa13.66□□□□□ -0.22
CNOT1-220ENST00000569916 HOXC11O43248 304 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms