RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RABEPKQ7Z6M1 372 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CTAGE6Q86UF2 777 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CTAGE4Q8IX94 777 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ANKS4BQ8N8V4 417 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 AVL9Q8NBF6 648 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 Q8NFD4 153 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MRPS27Q92552 414 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 ATOH1Q92858 354 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 KIAA1191Q96A73 305 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 DDX19AQ9NUU7 478 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 SUCOQ9UBS9 1254 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 TBC1D29Q9UFV1 150 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 EGFL7Q9UHF1 273 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 DDX25Q9UHL0 483 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 PROM1O43490 865 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 GJB3O75712 270 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 DGAT1O75907 488 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 ATP5HO75947 161 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CDC25AP30304 524 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CIITAP33076 1130 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 ZNF267Q14586 743 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 KCTD21Q4G0X4 260 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 ANKRD33Q7Z3H0 272 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SYTL5Q8TDW5 730 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 PTPN18Q99952 460 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SELENOSQ9BQE4 189 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 ADAM19Q9H013 955 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PXMP2Q9NR77 195 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SIRT5Q9NXA8 310 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 NKIRAS2Q9NYR9 191 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 C15orf41Q9Y2V0 281 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SMIM35A0A1B0GVV1 85 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 TAL1P17542 331 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 L1CAMP32004 1257 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CCT8P50990 548 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CCR3P51677 355 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 EPHB3P54753 998 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 RPL10AP62906 217 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 KDSRQ06136 332 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 AADACL4Q5VUY2 407 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 RESP18Q5W5W9 173 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PLPPR4Q7Z2D5 763 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SIAH1Q8IUQ4 282 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 LURAP1LQ8IV03 231 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 LRRC71Q8N4P6 559 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 MRPS31Q92665 395 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 KIF12Q96FN5 646 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PRICKLE1Q96MT3 831 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 B3GNT4Q9C0J1 378 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 SMOC1Q9H4F8 434 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CCDC177Q9NQR7 707 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 IL1RAPL1Q9NZN1 696 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 UXTQ9UBK9 157 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 RASAL2Q9UJF2 1139 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PHF20L1A8MW92 1017 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 K7ERI5 159 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 DCXO43602 365 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 GLUD1P00367 558 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CPB1P15086 417 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 KCNA5P22460 613 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 CMA1P23946 247 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 ACAT1P24752 427 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 NOVP48745 357 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 CRYBB1P53674 252 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 GUCA2AQ02747 115 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 SMARCB1Q12824 385 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 BFSP1Q12934 665 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 EPHA7Q15375 998 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 C2orf27AQ580R0 203 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PRAMEF19Q5SWL8 479 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 GJD3Q8N144 294 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 FAM133AQ8N9E0 248 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 RIN3Q8TB24 985 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 MXRA8Q9BRK3 442 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PRDM12Q9H4Q4 367 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 AFF4Q9UHB7 1163 aaKnown RBP6.93□□□□□ -1.3
SMG1-217ENST00000569764 SLC12A6Q9UHW9 1150 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 FZD1Q9UP38 647 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PCDHGC5Q9Y5F6 944 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 PSME4Q14997 1843 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
SMG1-217ENST00000569764 REV3LO60673 3130 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CCDC151A5D8V7 595 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 C16orf96A6NNT2 1141 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 AP3D1O14617 1153 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TSPAN9O75954 239 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 MICAL2O94851 1124 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 IVLP07476 585 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms