RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 IL37Q9NZH6 218 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 NAGPAQ9UK23 515 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 USP3Q9Y6I4 520 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 C2orf16Q68DN1 1984 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 MYH10P35580 1976 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 A0A1W2PRU2 124 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 ANKRD62A6NC57 917 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 PAPLNO95428 1278 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 MMP8P22894 467 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 DDX6P26196 483 aaKnown RBP eCLIP16.81■□□□□ 0.28
USB1-215ENST00000569252 RPL34P49207 117 aaKnown RBP16.81■□□□□ 0.28
USB1-215ENST00000569252 GFPT1Q06210 699 aaPredicted RBP16.81■□□□□ 0.28
USB1-215ENST00000569252 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
USB1-215ENST00000569252 ZNF268Q14587 947 aaPredicted RBP16.81■□□□□ 0.28
USB1-215ENST00000569252 PM20D1Q6GTS8 502 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 MMS22LQ6ZRQ5 1243 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 PHF13Q86YI8 300 aaPredicted RBP16.81■□□□□ 0.28
USB1-215ENST00000569252 SCML4Q8N228 414 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 FAM149B1Q96BN6 582 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.81■□□□□ 0.28
USB1-215ENST00000569252 CYTH4Q9UIA0 394 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 DENND4AQ7Z401 1863 aa16.81■□□□□ 0.28
USB1-215ENST00000569252 A0A087X0T9 212 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 FAM170AA1A519 330 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 GLI1P08151 1106 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 FAM228BP0C875 321 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 MYBL1P10243 752 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 DESP17661 470 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 GABRB2P47870 512 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 EPHA5P54756 1037 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 DAOAP59103 153 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 YWHAGP61981 247 aaKnown RBP eCLIP16.8■□□□□ 0.28
USB1-215ENST00000569252 NTHL1P78549 312 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 SLC6A3Q01959 620 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 PTPN20Q4JDL3 420 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 HECTD3Q5T447 861 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 RSRC2Q7L4I2 434 aaKnown RBP16.8■□□□□ 0.28
USB1-215ENST00000569252 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
USB1-215ENST00000569252 C11orf70Q9BRQ4 267 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 SYT11Q9BT88 431 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 SELENOOQ9BVL4 669 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 TRPC7Q9HCX4 862 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
USB1-215ENST00000569252 ABCC13Q9NSE7 274 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 GMIPQ9P107 970 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
USB1-215ENST00000569252 EPN1Q9Y6I3 576 aaPredicted RBP16.8■□□□□ 0.28
USB1-215ENST00000569252 EP300Q09472 2414 aaPredicted RBP16.8■□□□□ 0.28
USB1-215ENST00000569252 NCANO14594 1321 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 CLUHO75153 1309 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 FAM92AA1XBS5 289 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 ZNF840PA6NDX5 716 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 SOBPA7XYQ1 873 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 NARSO43776 548 aaKnown RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 F11P03951 625 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 ERBB2P04626 1255 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 RNASE9P60153 205 aaKnown RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 YWHAZP63104 245 aaKnown RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 BSPRYQ5W0U4 402 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 GET4Q7L5D6 327 aaPredicted RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 LRRC8AQ8IWT6 810 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 MCOLN2Q8IZK6 566 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 LRRC3Q9BY71 257 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 ISCUQ9H1K1 167 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
USB1-215ENST00000569252 PARVAQ9NVD7 372 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
USB1-215ENST00000569252 TRAV19A0A0A6YYK7 116 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 HSF2BPO75031 334 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 LTFP02788 710 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 H2AFZP0C0S5 128 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 RARGP13631 454 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 PFKLP17858 780 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 AVPR1AP37288 418 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 MAGEA1P43355 309 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 GPC5P78333 572 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 KRT83P78385 493 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 TEAD2Q15562 447 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 SNX30Q5VWJ9 437 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 DNAJC24Q6P3W2 148 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 H2AFVQ71UI9 128 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 GAREM2Q75VX8 874 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 OTOP3Q7RTS5 596 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms