RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DOT1LQ8TEK3 1739 aa4.06□□□□□ -1.76
HMGB1P6-201ENST00000569046 QRICH2Q9H0J4 1663 aa4.06□□□□□ -1.76
HMGB1P6-201ENST00000569046 ATP10DQ9P241 1426 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 LY75O60449 1722 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 CFAP69A5D8W1 941 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 EXOC5O00471 708 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 SH3BP5O60239 455 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 IGLV2-14P01704 120 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 CSF1RP07333 972 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZFXP17010 805 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 PPIFP30405 207 aaKnown RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 LIPAP38571 399 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 SLC13A2Q13183 592 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 DHX8Q14562 1220 aaKnown RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 BRD3Q15059 726 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 GFOD2Q3B7J2 385 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 LMBRD2Q68DH5 695 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 SFRP4Q6FHJ7 346 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 RGS7BPQ6MZT1 257 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 KSR2Q6VAB6 950 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 RD3Q7Z3Z2 195 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 DTX2Q86UW9 622 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 MICU3Q86XE3 530 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ATG4AQ8WYN0 398 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 RAPGEF4Q8WZA2 1011 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 NELL2Q99435 816 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ARPC5LQ9BPX5 153 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 PCGF6Q9BYE7 350 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 CXorf36Q9H7Y0 433 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 EHD3Q9NZN3 535 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 SLC17A6Q9P2U8 582 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ARPP21Q9UBL0 812 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ADAM21Q9UKJ8 722 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 ENTPD2Q9Y5L3 495 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 COX11Q9Y6N1 276 aa4.05□□□□□ -1.76
HMGB1P6-201ENST00000569046 PPIP5K1Q6PFW1 1433 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 FRMPD2Q68DX3 1309 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 CCDC189A1A4V9 331 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 CCDC151A5D8V7 595 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 GOLGA6CA6NDK9 693 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 GOLGA6BA6NDN3 693 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 MYO1CO00159 1063 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 IFRD1O00458 451 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 TBC1D4O60343 1298 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 URI1O94763 535 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 IL6RP08887 468 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 GOLGA6DP0CG33 693 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ADORA2AP29274 412 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 CLCN2P51788 898 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 MYO1EQ12965 1108 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 HLTFQ14527 1009 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 TSTD2Q5T7W7 516 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 RNF220Q5VTB9 566 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 DCAF12L1Q5VU92 463 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZDHHC24Q6UX98 284 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 CCDC149Q6ZUS6 474 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 MPP5Q8N3R9 675 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 OR56A3Q8NH54 315 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 TIFAQ96CG3 184 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZNF764Q96H86 408 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 UROC1Q96N76 676 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 TIMP4Q99727 224 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ALG8Q9BVK2 526 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 MS4A7Q9GZW8 240 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZNF700Q9H0M5 742 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 FAM204AQ9H8W3 233 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 GOLGA6AQ9NYA3 693 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 PNMA2Q9UL42 364 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 SHOC2Q9UQ13 582 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 CEP350Q5VT06 3117 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 TAF1LQ8IZX4 1826 aa4.04□□□□□ -1.76
HMGB1P6-201ENST00000569046 POLR3AO14802 1390 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 CPDO75976 1380 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 CCDC88AQ3V6T2 1871 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 PCSK5Q92824 1860 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 WDR17Q8IZU2 1322 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 FRS3O43559 492 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 TTLL1O95922 423 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 ZBED1O96006 694 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 HRGP04196 525 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 MYF5P13349 255 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 KCNA3P22001 575 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 DGKEP52429 567 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 ATXN1P54253 815 aaKnown RBP4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 WNT3P56703 355 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 FMO1Q01740 532 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 BMPR2Q13873 1038 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 E2F2Q14209 437 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 PTCHD3Q3KNS1 767 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 PLA1AQ53H76 456 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 C3orf38Q5JPI3 329 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 AKNAD1Q5T1N1 836 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 TREML2Q5T2D2 321 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 SRGAP1Q7Z6B7 1085 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 GRASPQ7Z6J2 395 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 AMIGO2Q86SJ2 522 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms