RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 FTH1P19P0C7X4 201 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 TNNC1P63316 161 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
USB1-214ENST00000568848 SNRNP35Q16560 246 aaKnown RBP15.75■□□□□ 0.11
USB1-214ENST00000568848 PLEKHG6Q3KR16 790 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
USB1-214ENST00000568848 HECTD3Q5T447 861 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 SLCO6A1Q86UG4 719 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 CHPFQ8IZ52 775 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 BBC3Q96PG8 261 aaPredicted RBP15.75■□□□□ 0.11
USB1-214ENST00000568848 CGRRF1Q99675 332 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 ELOVL4Q9GZR5 314 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 KRT82Q9NSB4 513 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 GPSM3Q9Y4H4 160 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 NUMA1Q14980 2115 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 SETXQ7Z333 2677 aaKnown RBP15.74■□□□□ 0.11
USB1-214ENST00000568848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.74■□□□□ 0.11
USB1-214ENST00000568848 TACC1O75410 805 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 GJB3O75712 270 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 PFKLP17858 780 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 NTSR1P30989 418 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 GRIK2Q13002 908 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 TRIP6Q15654 476 aaKnown RBP15.74■□□□□ 0.11
USB1-214ENST00000568848 BTBD8Q5XKL5 378 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 GRAMD4Q6IC98 578 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 ZCCHC9Q8N567 271 aaKnown RBP15.74■□□□□ 0.11
USB1-214ENST00000568848 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
USB1-214ENST00000568848 SMOQ99835 787 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 PTPRBP23467 1997 aa15.74■□□□□ 0.11
USB1-214ENST00000568848 GOLGA8CPA6NN73 597 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 AP1G2O75843 785 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 TYRP14679 529 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 BNC1Q01954 994 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 HSF5Q4G112 596 aaPredicted RBP15.73■□□□□ 0.11
USB1-214ENST00000568848 PDZD3Q86UT5 571 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 NAXDQ8IW45 347 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 CCDC65Q8IXS2 484 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 FUKQ8N0W3 1084 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 MRGPRX1Q96LB2 322 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 BBS2Q9BXC9 721 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 NACA2Q9H009 215 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 MIR1-1HGQ9H1L0 117 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 BLZF1Q9H2G9 400 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 NMUR1Q9HB89 426 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 FAM49BQ9NUQ9 324 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 TBC1D14Q9P2M4 693 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 GOLGA4Q13439 2230 aaKnown RBP15.73■□□□□ 0.11
USB1-214ENST00000568848 ASXL3Q9C0F0 2248 aa15.73■□□□□ 0.11
USB1-214ENST00000568848 UPK3BL1B0FP48 263 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 UPK3BL2E5RIL1 263 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 CYP26A1O43174 497 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 TLR5O60602 858 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 ZDHHC11BP0C7U3 371 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 TXLNAP40222 546 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 PPP3CCP48454 512 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 MAP3K7CLP57077 242 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 ALCAMQ13740 583 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 PSMD6Q15008 389 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 SPOPLQ6IQ16 392 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 CCDC73Q6ZRK6 1079 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 EPM2AIP1Q7L775 607 aaPredicted RBP15.72■□□□□ 0.11
USB1-214ENST00000568848 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
USB1-214ENST00000568848 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 DHX58Q96C10 678 aa15.72■□□□□ 0.11
USB1-214ENST00000568848 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
USB1-214ENST00000568848 DNAAF2Q9NVR5 837 aaKnown RBP15.72■□□□□ 0.11
USB1-214ENST00000568848 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
USB1-214ENST00000568848 VNN1O95497 513 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 CISD3P0C7P0 127 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 ADORA2BP29275 332 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 ASIC1P78348 528 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 BIRC3Q13489 604 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 TRPC3Q13507 836 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.11
USB1-214ENST00000568848 E2F4Q16254 413 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 LAYNQ6UX15 382 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 SLC36A4Q6YBV0 504 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 CEP76Q8TAP6 659 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 SLC2A14Q8TDB8 520 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 SORCS1Q8WY21 1168 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 TOE1Q96GM8 510 aaKnown RBP15.71■□□□□ 0.11
USB1-214ENST00000568848 TWNKQ96RR1 684 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 GPR174Q9BXC1 333 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 DMAP1Q9NPF5 467 aaPredicted RBP15.71■□□□□ 0.11
USB1-214ENST00000568848 EHD2Q9NZN4 543 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 CLEC4EQ9ULY5 219 aa15.71■□□□□ 0.11
USB1-214ENST00000568848 FNDC3AQ9Y2H6 1198 aaKnown RBP15.71■□□□□ 0.11
USB1-214ENST00000568848 FAM149AA5PLN7 773 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 FAM221BA6H8Z2 402 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 CACNG3O60359 315 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 PHACTR2O75167 634 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 NDUFS2O75306 463 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 HMBSP08397 361 aa15.7■□□□□ 0.1
USB1-214ENST00000568848 CLDN6P56747 220 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms