RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TRBV23-1A0A0A0MS06 115 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 ESYT2A0FGR8 921 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 C7orf72A4D263 438 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 GOLGA8AA7E2F4 631 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 GOLGA8BA8MQT2 603 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 TSPAN1O60635 241 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 TADA2AO75478 443 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 ECI2O75521 394 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 PSMD10O75832 226 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 ERLIN2O94905 339 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 CPP00450 1065 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 MSL3P1P0C860 447 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 PAMP19021 973 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 AKAP5P24588 427 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 PMLP29590 882 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 GNA11P29992 359 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 HOXA9P31269 272 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 NPEPPSP55786 919 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 LAMTOR4Q0VGL1 99 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 SRSF5Q13243 272 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 SIM2Q14190 667 aaPredicted RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 LONRF2Q1L5Z9 754 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 PABPC1LQ4VXU2 614 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 CEP57Q86XR8 500 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 SCUBE1Q8IWY4 988 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 GPR65Q8IYL9 337 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 GSTCDQ8NEC7 633 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 RDM1Q8NG50 284 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 SLC7A14Q8TBB6 771 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 HASPINQ8TF76 798 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 KCTD13Q8WZ19 329 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 DDX1Q92499 740 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 MCRS1Q96EZ8 462 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 CPB2Q96IY4 423 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 TCEANC2Q96MN5 208 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 CDC6Q99741 560 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 JPH2Q9BR39 696 aaPredicted RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 PAAF1Q9BRP4 392 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 DHRS4Q9BTZ2 278 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 APOL6Q9BWW8 343 aa6.22□□□□□ -1.41
CDH13-211ENST00000568770 LSG1Q9H089 658 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 DNMT3BQ9UBC3 853 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 NDRG2Q9UN36 371 aaKnown RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 NUP210Q8TEM1 1887 aaPredicted RBP6.22□□□□□ -1.41
CDH13-211ENST00000568770 IGSF10Q6WRI0 2623 aa6.21□□□□□ -1.41
CDH13-211ENST00000568770 KLF18A0A0U1RQI7 1052 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 TLDC2A0PJX2 215 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 MAN2B1O00754 1011 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 ADAM12O43184 909 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NRDCO43847 1150 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 PROS1P07225 676 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 ENDOUP21128 410 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 AXLP30530 894 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 FNTBP49356 437 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 PSMC5P62195 406 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 SHC2P98077 582 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 SATB1Q01826 763 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 MVKQ03426 396 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 ACAP1Q15027 740 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NECTIN1Q15223 517 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NR0B2Q15466 257 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 PSMD5Q16401 504 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 SLC5A9Q2M3M2 681 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 FAM171A1Q5VUB5 890 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 HLA-DQA1Q5Y7H0 255 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 IL31Q6EBC2 164 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 TANGO2Q6ICL3 276 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NOTUMQ6P988 496 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 B3GNT9Q6UX72 402 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 USP53Q70EK8 1073 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 FERMT3Q86UX7 667 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 PPIL6Q8IXY8 311 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 OXR1Q8N573 874 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 RNF149Q8NC42 400 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 RCBTB1Q8NDN9 531 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 LNX1Q8TBB1 728 aaPredicted RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 BICD2Q8TD16 824 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 CCDC12Q8WUD4 166 aaPredicted RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 PSPC1Q8WXF1 523 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 DNASE1L2Q92874 299 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 TTPALQ9BTX7 342 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 TRIM6Q9C030 488 aaPredicted RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 CSRNP2Q9H175 543 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NXF3Q9H4D5 531 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 DHX33Q9H6R0 707 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 LMAN1LQ9HAT1 526 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 GDE1Q9NZC3 331 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 FBLN5Q9UBX5 448 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 FBXL7Q9UJT9 491 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 NAP1L2Q9ULW6 460 aaPredicted RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 MRPS23Q9Y3D9 190 aaKnown RBP6.21□□□□□ -1.42
CDH13-211ENST00000568770 MYO16Q9Y6X6 1858 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 CITO14578 2027 aa6.21□□□□□ -1.42
CDH13-211ENST00000568770 SF3B1O75533 1304 aaKnown RBP eCLIP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms