RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 PDE4CQ08493 712 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 ARHGAP44Q17R89 818 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 ITPRIPL2Q3MIP1 535 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 C11orf57Q6ZUT1 292 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 SCD5Q86SK9 330 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 PIGZQ86VD9 579 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 LONP2Q86WA8 852 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 TSPAN16Q9UKR8 245 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 ARHGAP26Q9UNA1 814 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 KMT2BQ9UMN6 2715 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 NUP205Q92621 2012 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 PES1O00541 588 aaKnown RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 FGFR1OPO95684 399 aaKnown RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 HMBSP08397 361 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ZDHHC11BP0C7U3 371 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 PNMA6AP0CW24 399 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 RARGP13631 454 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 KRT5P13647 590 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 LCP1P13796 627 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 CNR2P34972 360 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 USP8P40818 1118 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 SLC6A11P48066 632 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 IFNAR2P48551 515 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 GALK1P51570 392 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 TKTL1P51854 596 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 SLC7A9P82251 487 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 MESP2Q0VG99 397 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 USP4Q13107 963 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 CCINQ13939 588 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 CSRP2Q16527 193 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 EML3Q32P44 896 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 SGO2Q562F6 1265 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 PPM1JQ5JR12 505 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 HECTD3Q5T447 861 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ARHGAP17Q68EM7 881 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 PKN3Q6P5Z2 889 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 FOXR2Q6PJQ5 311 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 WDR5BQ86VZ2 330 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 SFTPA1Q8IWL2 248 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ANKRD52Q8NB46 1076 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 OSCP1Q8WVF1 389 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
SF3B3-211ENST00000568291 NACA2Q9H009 215 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 ECT2Q9H8V3 914 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 TAB2Q9NYJ8 693 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 EHD2Q9NZN4 543 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 NAGPAQ9UK23 515 aa10.01□□□□□ -0.81
SF3B3-211ENST00000568291 FAM92AA1XBS5 289 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 GOLGA6L22H0YM25 854 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 O00370 1275 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 TLR5O60602 858 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 OLFM2O95897 454 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 EGFP01133 1207 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 ADRB1P08588 477 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 VDRP11473 427 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
SF3B3-211ENST00000568291 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
SF3B3-211ENST00000568291 TBXAS1P24557 533 aaPredicted RBP10□□□□□ -0.81
SF3B3-211ENST00000568291 HOXA6P31267 233 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 GJA4P35212 333 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 CETN1Q12798 172 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 C10orf120Q5SQS8 335 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 FSTL4Q6MZW2 842 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 MIB1Q86YT6 1006 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 ADGRG2Q8IZP9 1017 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 SYNPOQ8N3V7 929 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 NAT16Q8N8M0 369 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 PDZD8Q8NEN9 1154 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 CLEC4CQ8WTT0 213 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
SF3B3-211ENST00000568291 CEP295NLQ96MC4 621 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 ULBP1Q9BZM6 244 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 FBXO44Q9H4M3 255 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 THAP9Q9H5L6 903 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 KIF9Q9HAQ2 790 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 SIX2Q9NPC8 291 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 TMEM63CQ9P1W3 806 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 SCML2Q9UQR0 700 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 NFE2L3Q9Y4A8 694 aa10□□□□□ -0.81
SF3B3-211ENST00000568291 THADAQ6YHU6 1953 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 BECN2A8MW95 431 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 KCNJ18B7U540 433 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 M0QYV0 167 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 TRIM24O15164 1050 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PMM2O15305 246 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 P4HA2O15460 535 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 GDF9O60383 454 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 FOXD2O60548 495 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 KRT37O76014 449 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 LETM1O95202 739 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PON1P27169 355 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PPP3CCP48454 512 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PXNP49023 591 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms