RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 DMC1Q14565 340 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 DHCR24Q15392 516 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 CBWD6Q4V339 395 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 CBWD3Q5JTY5 395 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 CBWD5Q5RIA9 395 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 KRT39Q6A163 491 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 FAM160A2Q8N612 972 aaPredicted RBP13.6□□□□□ -0.23
TSC2-220ENST00000568238 JAKMIP2Q96AA8 810 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 HNRNPABQ99729 332 aaKnown RBP13.6□□□□□ -0.23
TSC2-220ENST00000568238 TLR8Q9NR97 1041 aaKnown RBP13.6□□□□□ -0.23
TSC2-220ENST00000568238 POLR3BQ9NW08 1133 aaPredicted RBP13.6□□□□□ -0.23
TSC2-220ENST00000568238 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 TBC1D14Q9P2M4 693 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 SH3BP1Q9Y3L3 701 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSC2-220ENST00000568238 KCNJ18B7U540 433 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 CYP26A1O43174 497 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 TLR5O60602 858 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 APBB3O95704 486 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 ADH5P11766 374 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
TSC2-220ENST00000568238 SEC13P55735 322 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 KCNJ12Q14500 433 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 CDKAL1Q5VV42 579 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 CLEC20AQ6ZU45 233 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 GPRIN1Q7Z2K8 1008 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 DHX40Q8IX18 779 aaKnown RBP13.59□□□□□ -0.23
TSC2-220ENST00000568238 ADGRG2Q8IZP9 1017 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 OTUB2Q96DC9 234 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 BPIFA3Q9BQP9 254 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 CBX8Q9HC52 389 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 PNPLA8Q9NP80 782 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 SEMA4GQ9NTN9 838 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 SCML2Q9UQR0 700 aa13.59□□□□□ -0.23
TSC2-220ENST00000568238 MYO18AQ92614 2054 aaKnown RBP13.59□□□□□ -0.23
TSC2-220ENST00000568238 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.58□□□□□ -0.24
TSC2-220ENST00000568238 K7EQS6 105 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 AXIN1O15169 862 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
TSC2-220ENST00000568238 IRF1P10914 325 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 FMO5P49326 533 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
TSC2-220ENST00000568238 NCAPHQ15003 741 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 C2orf27AQ580R0 203 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 TCP11X2Q5H9J9 407 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 LY6G5CQ5SRR4 150 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 RHBDF2Q6PJF5 856 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 PRR23CQ6ZRP0 262 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 CACNA2D4Q7Z3S7 1137 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 FBXL13Q8NEE6 735 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 TSTD1Q8NFU3 115 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 USP33Q8TEY7 942 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 WHAMMQ8TF30 809 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 TSPY26PQ9H489 355 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
TSC2-220ENST00000568238 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.24
TSC2-220ENST00000568238 BECN2A8MW95 431 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 HHLA1C9JL84 531 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
TSC2-220ENST00000568238 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
TSC2-220ENST00000568238 KAT7O95251 611 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 APODP05090 189 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 PRKCSHP14314 528 aaPredicted RBP13.57□□□□□ -0.24
TSC2-220ENST00000568238 ACO1P21399 889 aaKnown RBP13.57□□□□□ -0.24
TSC2-220ENST00000568238 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
TSC2-220ENST00000568238 PGFP49763 221 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 KDSRQ06136 332 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 GOLGA8FQ08AF8 430 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 GOLGA8DPQ0D2H9 430 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 CSRP2Q16527 193 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 ZNF394Q53GI3 561 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 LUZP1Q86V48 1076 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 KBTBD6Q86V97 674 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 LOXL4Q96JB6 756 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 PNKPQ96T60 521 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 CYLDQ9NQC7 956 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 ARHGEF4Q9NR80 690 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 MMP17Q9ULZ9 603 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 NUP205Q92621 2012 aa13.57□□□□□ -0.24
TSC2-220ENST00000568238 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 HOXC11O43248 304 aaPredicted RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 EPN2O95208 641 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 TBX18O95935 607 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 GRIA2P42262 883 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 SLC6A11P48066 632 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 MRPS21P82921 87 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms