RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 NACA2Q9H009 215 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 LINC00597Q9H2U6 94 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 SPHK2Q9NRA0 654 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH3-206ENST00000567674 TMEM51Q9NW97 253 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 HESX1Q9UBX0 185 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 RWDD2AQ9UIY3 292 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 GMEB2Q9UKD1 530 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
CDH3-206ENST00000567674 STARD13Q9Y3M8 1113 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
CDH3-206ENST00000567674 EP300Q09472 2414 aaPredicted RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 GTPBP10A4D1E9 387 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 LATS1O95835 1130 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 OPRD1P41143 372 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 DGKEP52429 567 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 LMNB2Q03252 620 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 BST2Q10589 180 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 BYSLQ13895 437 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 CNGA2Q16280 664 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 SGO2Q562F6 1265 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 SPDYCQ5MJ68 293 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 UBR7Q8N806 425 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 NELFBQ8WX92 580 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 COL26A1Q96A83 441 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 HSFY1Q96LI6 401 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 NT5C1BQ96P26 610 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 TRIM62Q9BVG3 475 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 FAM49BQ9NUQ9 324 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 GMIPQ9P107 970 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 HMGXB4Q9UGU5 601 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 SMG5Q9UPR3 1016 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 CNTN6Q9UQ52 1028 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 PCDHGA5Q9Y5G8 931 aa11.78□□□□□ -0.52
CDH3-206ENST00000567674 HELZP42694 1942 aaKnown RBP11.78□□□□□ -0.52
CDH3-206ENST00000567674 GREM1O60565 184 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 APBB3O95704 486 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 EGFP01133 1207 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 APODP05090 189 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CYP17A1P05093 508 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 ADH5P11766 374 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CD58P19256 250 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 BMP6P22004 513 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CDR1P51861 262 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 GAB4Q2WGN9 574 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CCDC40Q4G0X9 1142 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 BEND5Q7L4P6 421 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CACNA2D4Q7Z3S7 1137 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 ETFBKMTQ8IXQ9 262 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 EHBP1Q8NDI1 1231 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 LMO3Q8TAP4 145 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 USP33Q8TEY7 942 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 GAB3Q8WWW8 586 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 TATDN2Q93075 761 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.53
CDH3-206ENST00000567674 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 CNGB3Q9NQW8 809 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 RBM12Q9NTZ6 932 aaKnown RBP11.77□□□□□ -0.53
CDH3-206ENST00000567674 NCDNQ9UBB6 729 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 STRIP2Q9ULQ0 834 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 MMP17Q9ULZ9 603 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDH3-206ENST00000567674 OTOGLQ3ZCN5 2332 aa11.77□□□□□ -0.53
CDH3-206ENST00000567674 K7EQS6 105 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 GFRA2O00451 464 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 SART1O43290 800 aaKnown RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 RNF40O75150 1001 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 KAT7O95251 611 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 ZBED1O96006 694 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 AFPP02771 609 aaKnown RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 RARGP13631 454 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 ADORA2BP29275 332 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 DPP6P42658 865 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 PDE4CQ08493 712 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 KCNH2Q12809 1159 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 SIM2Q14190 667 aaPredicted RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 PKDCCQ504Y2 493 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 EOGTQ5NDL2 527 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 Q6ZNB5 142 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 Q6ZS52 159 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 PIGZQ86VD9 579 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 RASSF3Q86WH2 238 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 CPXM2Q8N436 756 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 ZNF557Q8N988 423 aaPredicted RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 TTC8Q8TAM2 541 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 SLC2A11Q9BYW1 496 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
CDH3-206ENST00000567674 FBRSL1Q9HCM7 1045 aaKnown RBP11.76□□□□□ -0.53
CDH3-206ENST00000567674 ABCC13Q9NSE7 274 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms