RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ADH5	P11766	374 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	RARG	P13631	454 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	TNFRSF4	P43489	277 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SLC6A11	P48066	632 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	STX17	P56962	302 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	GAD2	Q05329	585 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	GOLGA8F	Q08AF8	430 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	GOLGA8DP	Q0D2H9	430 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	KCNH2	Q12809	1159 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	PAK1	Q13153	545 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SIM2	Q14190	667 aa	Predicted RBP	7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	CAMK4	Q16566	473 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	GAB4	Q2WGN9	574 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SGO2	Q562F6	1265 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	C10orf120	Q5SQS8	335 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	LY6G5C	Q5SRR4	150 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	BTBD8	Q5XKL5	378 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	LAIR1	Q6GTX8	287 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	KLHDC10	Q6PID8	442 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	PRR23B	Q6ZRT6	265 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SYT13	Q7L8C5	426 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	CCDC186	Q7Z3E2	898 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SCD5	Q86SK9	330 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	TADA2B	Q86TJ2	420 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	WDR5B	Q86VZ2	330 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	BBS7	Q8IWZ6	715 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	KIAA2013	Q8IYS2	634 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	ARHGAP18	Q8N392	663 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	TRIML1	Q8N9V2	468 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	EHBP1	Q8NDI1	1231 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	RPLP0P6	Q8NHW5	317 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	LMO3	Q8TAP4	145 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	USP33	Q8TEY7	942 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	EZH1	Q92800	747 aa	Predicted RBP	7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	WBP2	Q969T9	261 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	NT5C1B	Q96P26	610 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	PNKP	Q96T60	521 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	NMUR1	Q9HB89	426 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	CYLD	Q9NQC7	956 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	SPHK2	Q9NRA0	654 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	HESX1	Q9UBX0	185 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	NAGPA	Q9UK23	515 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	CTNND2	Q9UQB3	1225 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	PCDHB4	Q9Y5E5	795 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	USP3	Q9Y6I4	520 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	KNL1	Q8NG31	2342 aa		7.28	□□□□□ -1.24
SF3B3-209	ENST00000567635	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	HOXC11	O43248	304 aa	Predicted RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	MAP3K13	O43283	966 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	GREM1	O60565	184 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	KAT7	O95251	611 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZBED1	O96006	694 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PAEP	P09466	180 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CCDC192	P0DO97	292 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	IRF1	P10914	325 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PYGB	P11216	843 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CD19	P15391	556 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	HOXC13	P31276	330 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	EIF2D	P41214	584 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	GRIA2	P42262	883 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	TKTL1	P51854	596 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	BCAT1	P54687	386 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	SEC13	P55735	322 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	MARS	P56192	900 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	MRPS21	P82921	87 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	COG7	P83436	770 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PDE4C	Q08493	712 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	BST2	Q10589	180 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	SRSF5	Q13243	272 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	DMC1	Q14565	340 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CNGA2	Q16280	664 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	LPAL2	Q16609	132 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	GOLGA7B	Q2TAP0	167 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	ANO4	Q32M45	955 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PREPL	Q4J6C6	727 aa	Predicted RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	C2orf27A	Q580R0	203 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	RAB41	Q5JT25	222 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PM20D1	Q6GTS8	502 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	TMEM270	Q6UE05	265 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	NUDT18	Q6ZVK8	323 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CEP68	Q76N32	757 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PIGZ	Q86VD9	579 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	TMEM25	Q86YD3	366 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	TRIM59	Q8IWR1	403 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	UBR7	Q8N806	425 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	UBA3	Q8TBC4	463 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	ACD	Q96AP0	544 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	LRRC4	Q9HBW1	653 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	ARHGEF4	Q9NR80	690 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	CLIC5	Q9NZA1	410 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	WDR35	Q9P2L0	1181 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	RWDD2A	Q9UIY3	292 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	LSM7	Q9UK45	103 aa	Known RBP	7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	GMEB2	Q9UKD1	530 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	NUDT5	Q9UKK9	219 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZNF510	Q9Y2H8	683 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms