RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PLA2G4AP47712 749 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 LMAN2Q12907 356 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 CCDC6Q16204 474 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 EDRF1Q3B7T1 1238 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 KRT39Q6A163 491 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 GRAMD4Q6IC98 578 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 SLC36A4Q6YBV0 504 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 KRBA2Q6ZNG9 492 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 ARHGAP18Q8N392 663 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
LINC01238-205ENST00000567549 TERB1Q8NA31 727 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 MDGA1Q8NFP4 955 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 ZFRQ96KR1 1074 aaKnown RBP19.63■□□□□ 0.73
LINC01238-205ENST00000567549 NUSAP1Q9BXS6 441 aaKnown RBP19.63■□□□□ 0.73
LINC01238-205ENST00000567549 SDCBP2Q9H190 292 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 DNMT3LQ9UJW3 386 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 ANGPTL2Q9UKU9 493 aa19.63■□□□□ 0.73
LINC01238-205ENST00000567549 IRF1P10914 325 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 EPB41P11171 864 aaKnown RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 ACO1P21399 889 aaKnown RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 HOXD12P35452 270 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 KIR2DL1P43626 348 aaPredicted RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 SLC6A11P48066 632 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 DHPSP49366 369 aaPredicted RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 NDUFA8P51970 172 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 DPYDQ12882 1025 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 C10orf76Q5T2E6 689 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 CLEC20AQ6ZU45 233 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 BBS7Q8IWZ6 715 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 ETFBKMTQ8IXQ9 262 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 ZNF276Q8N554 614 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 OLIG1Q8TAK6 271 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 CHAMP1Q96JM3 812 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 LSM14BQ9BX40 385 aaKnown RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 DCLK3Q9C098 648 aa19.62■□□□□ 0.73
LINC01238-205ENST00000567549 POLR3BQ9NW08 1133 aaPredicted RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 HOOK1Q9UJC3 728 aaKnown RBP19.62■□□□□ 0.73
LINC01238-205ENST00000567549 MYOFQ9NZM1 2061 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 GOLGA6L4A6NEF3 574 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 SCAMP3O14828 347 aaKnown RBP19.61■□□□□ 0.73
LINC01238-205ENST00000567549 DCLK1O15075 740 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 CETN3O15182 167 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 AP5Z1O43299 807 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 ZNF217O75362 1048 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 TULP3O75386 442 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 HOXC13P31276 330 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 P2RY2P41231 377 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 GCLMP48507 274 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 YWHAEP62258 255 aaKnown RBP19.61■□□□□ 0.73
LINC01238-205ENST00000567549 COG7P83436 770 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 C12orf29Q8N999 325 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 ZMIZ2Q8NF64 920 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 HMGB4Q8WW32 186 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 CNTNAP3BQ96NU0 1288 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 TSG101Q99816 390 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 BBS2Q9BXC9 721 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 CNTNAP3Q9BZ76 1288 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 TMEM9BQ9NQ34 198 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 DNAJC17Q9NVM6 304 aaKnown RBP19.61■□□□□ 0.73
LINC01238-205ENST00000567549 STARD13Q9Y3M8 1113 aa19.61■□□□□ 0.73
LINC01238-205ENST00000567549 TCRBV21S2A2A0A5A6 115 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 SGK1O00141 431 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 CACNG3O60359 315 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 CILPO75339 1184 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 NTSR1P30989 418 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 CHKAP35790 457 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 MXI1P50539 228 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 C10orf120Q5SQS8 335 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 SPOPLQ6IQ16 392 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 CCDC186Q7Z3E2 898 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 C12orf40Q86WS4 652 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 NAT16Q8N8M0 369 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 FBXL13Q8NEE6 735 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 KLF16Q9BXK1 252 aaPredicted RBP19.6■□□□□ 0.73
LINC01238-205ENST00000567549 DUSP16Q9BY84 665 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 CLIC5Q9NZA1 410 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 MARK1Q9P0L2 795 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 HMGXB4Q9UGU5 601 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 EVLQ9UI08 416 aaPredicted RBP19.6■□□□□ 0.73
LINC01238-205ENST00000567549 NAGPAQ9UK23 515 aa19.6■□□□□ 0.73
LINC01238-205ENST00000567549 TPRP12270 2363 aaKnown RBP19.59■□□□□ 0.73
LINC01238-205ENST00000567549 PLXND1Q9Y4D7 1925 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 NEDD8-MDP1E9PL57 170 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 TM4SF5O14894 197 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 NPC1O15118 1278 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 ZNF202O95125 648 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 RARGP13631 454 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 HOXB2P14652 356 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 CD58P19256 250 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 ORC1Q13415 861 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 TMEM92Q6UXU6 159 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 SYT12Q8IV01 421 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 CEP76Q8TAP6 659 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 JAKMIP2Q96AA8 810 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 HEXIM2Q96MH2 286 aaKnown RBP19.59■□□□□ 0.73
LINC01238-205ENST00000567549 UBXN6Q9BZV1 441 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 MMRN2Q9H8L6 949 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 STRIP2Q9ULQ0 834 aa19.59■□□□□ 0.73
LINC01238-205ENST00000567549 INVSQ9Y283 1065 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms