RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 CPQQ9Y646 472 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 OTOL1A6NHN0 477 aaPredicted RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 E5RJQ4 531 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 PIK3R2O00459 728 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 ZNF263O14978 683 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 FBXO21O94952 628 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 LCP1P13796 627 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 ACADSBP45954 432 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 STARD6P59095 220 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 YWHAGP61981 247 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF40-211ENST00000567365 NOMO3P69849 1222 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 FMO1Q01740 532 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 CDR2Q01850 454 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 EML3Q32P44 896 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 PTPN20Q4JDL3 420 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 MSANTD2Q6P1R3 559 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 PASD1Q8IV76 773 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 C1orf131Q8NDD1 294 aaKnown RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 OSCP1Q8WVF1 389 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 PIWIL1Q96J94 861 aaKnown RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 XPO4Q9C0E2 1151 aaKnown RBP13.02□□□□□ -0.33
RNF40-211ENST00000567365 ARHGEF3Q9NR81 526 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 GKN1Q9NS71 199 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 SMPD4Q9NXE4 827 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 IFNKQ9P0W0 207 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 KMT2EQ8IZD2 1858 aa13.02□□□□□ -0.33
RNF40-211ENST00000567365 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 DPYSL4O14531 572 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 MDM4O15151 490 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 AP5Z1O43299 807 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 CYP1A1P04798 512 aaPredicted RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 MMEP08473 750 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 MBL2P11226 248 aaPredicted RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 KRT9P35527 623 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 ATP5C1P36542 298 aaKnown RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 GABRB2P47870 512 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 PRKCQQ04759 706 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 TNK2Q07912 1038 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 GAB4Q2WGN9 574 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 SIX5Q8N196 739 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 PPP1R13BQ96KQ4 1090 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 PCMTD1Q96MG8 357 aaPredicted RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
RNF40-211ENST00000567365 PCDHB18PQ96TA0 734 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 AIPL1Q9NZN9 384 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
RNF40-211ENST00000567365 E2F8A0AVK6 867 aa13□□□□□ -0.33
RNF40-211ENST00000567365 LTFP02788 710 aa13□□□□□ -0.33
RNF40-211ENST00000567365 ERBB2P04626 1255 aa13□□□□□ -0.33
RNF40-211ENST00000567365 RALAP11233 206 aa13□□□□□ -0.33
RNF40-211ENST00000567365 UNGP13051 313 aaPredicted RBP13□□□□□ -0.33
RNF40-211ENST00000567365 GLULP15104 373 aa13□□□□□ -0.33
RNF40-211ENST00000567365 ARSAP15289 507 aa13□□□□□ -0.33
RNF40-211ENST00000567365 PRKCIP41743 596 aa13□□□□□ -0.33
RNF40-211ENST00000567365 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
RNF40-211ENST00000567365 PDGFRLQ15198 375 aa13□□□□□ -0.33
RNF40-211ENST00000567365 MLF2Q15773 248 aaPredicted RBP13□□□□□ -0.33
RNF40-211ENST00000567365 C10orf120Q5SQS8 335 aa13□□□□□ -0.33
RNF40-211ENST00000567365 TAF3Q5VWG9 929 aa13□□□□□ -0.33
RNF40-211ENST00000567365 TRIM68Q6AZZ1 485 aa13□□□□□ -0.33
RNF40-211ENST00000567365 SARM1Q6SZW1 724 aa13□□□□□ -0.33
RNF40-211ENST00000567365 OLFML1Q6UWY5 402 aa13□□□□□ -0.33
RNF40-211ENST00000567365 Q6ZNB5 142 aa13□□□□□ -0.33
RNF40-211ENST00000567365 HTR3DQ70Z44 454 aa13□□□□□ -0.33
RNF40-211ENST00000567365 DDX42Q86XP3 938 aaKnown RBP eCLIP13□□□□□ -0.33
RNF40-211ENST00000567365 YAF2Q8IY57 180 aa13□□□□□ -0.33
RNF40-211ENST00000567365 TMEM35BQ8NCS4 154 aa13□□□□□ -0.33
RNF40-211ENST00000567365 MIS12Q9H081 205 aa13□□□□□ -0.33
RNF40-211ENST00000567365 LINC00597Q9H2U6 94 aa13□□□□□ -0.33
RNF40-211ENST00000567365 ST7Q9NRC1 585 aa13□□□□□ -0.33
RNF40-211ENST00000567365 HEBP1Q9NRV9 189 aa13□□□□□ -0.33
RNF40-211ENST00000567365 GTSE1Q9NYZ3 720 aa13□□□□□ -0.33
RNF40-211ENST00000567365 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
RNF40-211ENST00000567365 CA14Q9ULX7 337 aa13□□□□□ -0.33
RNF40-211ENST00000567365 WNT6Q9Y6F9 365 aa13□□□□□ -0.33
RNF40-211ENST00000567365 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
RNF40-211ENST00000567365 MYOFQ9NZM1 2061 aa13□□□□□ -0.33
RNF40-211ENST00000567365 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
RNF40-211ENST00000567365 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
RNF40-211ENST00000567365 STC2O76061 302 aa12.99□□□□□ -0.33
RNF40-211ENST00000567365 IGLV3-25P01717 112 aa12.99□□□□□ -0.33
RNF40-211ENST00000567365 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms