RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 HDAC7Q8WUI4 952 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 IRGQQ8WZA9 623 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 NPY6RQ99463 290 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.47■□□□□ 0.55
HERC2-208ENST00000566635 COX16Q9P0S2 106 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 CCDC188H7C350 402 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 CAPN9O14815 690 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 FSCN2O14926 492 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 NCAM1P13591 858 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 DESP17661 470 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 ADCY2Q08462 1091 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 SCML4Q8N228 414 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 PRELID2Q8N945 189 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 DPF3Q92784 378 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 HINFPQ9BQA5 517 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 LBHD1Q9BQE6 289 aaPredicted RBP18.47■□□□□ 0.55
HERC2-208ENST00000566635 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 STAP1Q9ULZ2 295 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 PCDHB12Q9Y5F1 795 aa18.47■□□□□ 0.55
HERC2-208ENST00000566635 GOLGA6L10A0A0M3HER8 536 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 FGF18O76093 207 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 URODP06132 367 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 HAPLN1P10915 354 aaPredicted RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 PPM1AP35813 382 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 CDKN2BP42772 138 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 TUBB4BP68371 445 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 SLC7A5Q01650 507 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 KLF1Q13351 362 aaPredicted RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 CLUL1Q15846 466 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 BSPRYQ5W0U4 402 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 KAZNQ674X7 775 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 STRADAQ7RTN6 431 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 FAM131BQ86XD5 332 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 NUP93Q8N1F7 819 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 NT5C3BQ969T7 300 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 SNRNP25Q9BV90 132 aaKnown RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 PRDM4Q9UKN5 801 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 GREB1Q4ZG55 1949 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 hCG_1818297A0A087WSY0 165 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 M0QYT0 321 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 TLL1O43897 1013 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 KDELR1P24390 212 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 CA9Q16790 459 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 ZC3H12AQ5D1E8 599 aaKnown RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 BNIPLQ7Z465 357 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 CCDC185Q8N715 623 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 SLC7A14Q8TBB6 771 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 C2orf15Q8WU43 125 aaKnown RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
HERC2-208ENST00000566635 RAD9AQ99638 391 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 PARD6BQ9BYG5 372 aa18.46■□□□□ 0.55
HERC2-208ENST00000566635 ZNF638Q14966 1978 aaKnown RBP18.45■□□□□ 0.54
HERC2-208ENST00000566635 RAD51CO43502 376 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 YWHAGP61981 247 aaKnown RBP eCLIP18.45■□□□□ 0.54
HERC2-208ENST00000566635 NME3Q13232 169 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 KLHL23Q8NBE8 558 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 KCTD6Q8NC69 237 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 NMUR1Q9HB89 426 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 PIGVQ9NUD9 493 aa18.45■□□□□ 0.54
HERC2-208ENST00000566635 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
HERC2-208ENST00000566635 R3HDM2Q9Y2K5 976 aaKnown RBP18.45■□□□□ 0.54
HERC2-208ENST00000566635 PHF2O75151 1096 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 ZMYND10O75800 440 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 ATF6P18850 670 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 MTMR3Q13615 1198 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 SCD5Q86SK9 330 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 CMASQ8NFW8 434 aaPredicted RBP18.44■□□□□ 0.54
HERC2-208ENST00000566635 ATG4AQ8WYN0 398 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 ANKRD7Q92527 254 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 FAM118BQ9BPY3 351 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 MAGEB5Q9BZ81 275 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 ZBP1Q9H171 429 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 AMACRQ9UHK6 382 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 A0A1W2PQH9 124 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 CARNS1A5YM72 827 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 ENDOD1O94919 500 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 PTPN7P35236 360 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 RDXP35241 583 aaKnown RBP18.44■□□□□ 0.54
HERC2-208ENST00000566635 ARSEP51690 589 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 CDH6P55285 790 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 COPS2P61201 443 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 TFDP3Q5H9I0 405 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 TTC27Q6P3X3 843 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 GIPC2Q8TF65 315 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 TEKT4Q8WW24 435 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 C1orf54Q8WWF1 131 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 CALN1Q9BXU9 219 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 TMPRSS4Q9NRS4 437 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 CHD7Q9P2D1 2997 aa18.44■□□□□ 0.54
HERC2-208ENST00000566635 RANBP2P49792 3224 aaKnown RBP18.43■□□□□ 0.54
HERC2-208ENST00000566635 ZSCAN5CA6NGD5 496 aaPredicted RBP18.43■□□□□ 0.54
HERC2-208ENST00000566635 SEC24AO95486 1093 aa18.43■□□□□ 0.54
HERC2-208ENST00000566635 CETN2P41208 172 aa18.43■□□□□ 0.54
HERC2-208ENST00000566635 VSNL1P62760 191 aa18.43■□□□□ 0.54
HERC2-208ENST00000566635 DEUP1Q05D60 604 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms