RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 NAXDQ8IW45 347 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 FOXJ1Q92949 421 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 FBXO32Q969P5 355 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 SNX21Q969T3 373 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 WBP2Q969T9 261 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 DPEP3Q9H4B8 488 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 CCSER2Q9H7U1 834 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 HSPBP1Q9NZL4 362 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 FBXO10Q9UK96 956 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 PCDHB9Q9Y5E1 797 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 COL5A1P20908 1838 aaPredicted RBP13.53□□□□□ -0.24
RNF40-208ENST00000565995 CLDN5O00501 218 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 TRIM24O15164 1050 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 ZBTB24O43167 697 aaPredicted RBP13.52□□□□□ -0.25
RNF40-208ENST00000565995 CISD3P0C7P0 127 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 IDEP14735 1019 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 GNSP15586 552 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 ATICP31939 592 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 ZNF132P52740 706 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 WDR72Q3MJ13 1102 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 SLCO6A1Q86UG4 719 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 SCAMP5Q8TAC9 235 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 BAHD1Q8TBE0 780 aaPredicted RBP13.52□□□□□ -0.25
RNF40-208ENST00000565995 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 ACOX2Q99424 681 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 XYLT2Q9H1B5 865 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 CCDC86Q9H6F5 360 aaKnown RBP13.52□□□□□ -0.25
RNF40-208ENST00000565995 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 CYP8B1Q9UNU6 501 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 APOBEC2Q9Y235 224 aaKnown RBP13.52□□□□□ -0.25
RNF40-208ENST00000565995 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
RNF40-208ENST00000565995 ASH1LQ9NR48 2969 aaKnown RBP13.52□□□□□ -0.25
RNF40-208ENST00000565995 PLXNA2O75051 1894 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 A8MXQ7 604 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 PRRT4C9JH25 899 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 NDUFS2O75306 463 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 SNRPFP62306 86 aaKnown RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 ENPP2Q13822 863 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 PSMD6Q15008 389 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 COL28A1Q2UY09 1125 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 ANO4Q32M45 955 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 EPM2AIP1Q7L775 607 aaPredicted RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 TMPRSS7Q7RTY8 843 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 CCDC65Q8IXS2 484 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 CADM4Q8NFZ8 388 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 NOC3LQ8WTT2 800 aaKnown RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 ZNF516Q92618 1163 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 XPO6Q96QU8 1125 aaKnown RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 CGRRF1Q99675 332 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 KLF16Q9BXK1 252 aaPredicted RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 CSNK1G1Q9HCP0 422 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
RNF40-208ENST00000565995 PCOLCE2Q9UKZ9 415 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
RNF40-208ENST00000565995 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 MUC22E2RYF6 1773 aaPredicted RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 A0A087X0B3 334 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 A0A1B0GTW7 788 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNF40-208ENST00000565995 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 C7P10643 843 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 TYRP14679 529 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 TNNI1P19237 187 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 ACO1P21399 889 aaKnown RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 TXLNAP40222 546 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 WASP42768 502 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 SLC5A3P53794 718 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 TNNC1P63316 161 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 CYP24A1Q07973 514 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 GRIK2Q13002 908 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 C19orf48Q6RUI8 117 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 RGL4Q8IZJ4 473 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 ZNF276Q8N554 614 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 C1orf216Q8TAB5 229 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms