RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ACAT1P24752 427 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 GRIA4P48058 902 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 CLDN6P56747 220 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 MAPK7Q13164 816 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 SERINC3Q13530 473 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 MAPRE1Q15691 268 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 FUT11Q495W5 492 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ATG14Q6ZNE5 492 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 DHX40Q8IX18 779 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 SKA1Q96BD8 255 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 TMX3Q96JJ7 454 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ZNF560Q96MR9 790 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 SLITRK1Q96PX8 696 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 TTLL2Q9BWV7 592 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 RAB34Q9BZG1 259 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 TM9SF3Q9HD45 589 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 LARSQ9P2J5 1176 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 CLCA2Q9UQC9 943 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 STON1Q9Y6Q2 735 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ENO4A6NNW6 628 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 PRRT4C9JH25 899 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 KLK10O43240 276 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 IGLV3-19P01714 112 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 ABCB4P21439 1286 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 C21orf59P57076 290 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 USP46P62068 366 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 POU5F1Q01860 360 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 TAF10Q12962 218 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 NFATC3Q12968 1075 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 DNAJC3Q13217 504 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 ORC2Q13416 577 aaPredicted RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 TRIM29Q14134 588 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 UBAP2LQ14157 1087 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 ZNF174Q15697 407 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 FAM171BQ6P995 826 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 XKR5Q6UX68 686 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 NT5DC4Q86YG4 428 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 KCNE4Q8WWG9 221 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 DUSP9Q99956 384 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 TRIM4Q9C037 500 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 MKRN2Q9H000 416 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 L1RE1Q9UN81 338 aa9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 MYO18AQ92614 2054 aaKnown RBP9.62□□□□□ -0.87
VPS9D1-205ENST00000565452 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 A0A1B0GTQ1 180 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 BDNFP23560 247 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 CTSKP43235 329 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 DGKGP49619 791 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 ACADVLP49748 655 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 ACOT2P49753 483 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 ERVPABLB-1P60509 514 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 NOP14P78316 857 aaKnown RBP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 E2F1Q01094 437 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 IL9RQ01113 521 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 RAD51AP2Q09MP3 1159 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 CUL4AQ13619 759 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 KRT79Q5XKE5 535 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 BBS7Q8IWZ6 715 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 EID2Q8N6I1 236 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 DCBLD1Q8N8Z6 715 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 NECAB1Q8N987 351 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 NSUN7Q8NE18 718 aaKnown RBP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 TSC1Q92574 1164 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 HIC2Q96JB3 615 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 AGAP1Q9UPQ3 857 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 CITO14578 2027 aa9.61□□□□□ -0.87
VPS9D1-205ENST00000565452 CEP192Q8TEP8 1941 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 MYO16Q9Y6X6 1858 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 TERTO14746 1132 aaKnown RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 GABRDO14764 452 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CACNG3O60359 315 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CTDNEP1O95476 244 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 PIGRP01833 764 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 AFPP02771 609 aaKnown RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CISD3P0C7P0 127 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 TYRP14679 529 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CKMT2P17540 419 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CD27P26842 260 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CYP27A1Q02318 531 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 C6orf132Q5T0Z8 1188 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 HECTD3Q5T447 861 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 ADALQ6DHV7 355 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms