RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 VIPR2P41587 438 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 USP46P62068 366 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 NOMO3P69849 1222 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 CCDC186Q7Z3E2 898 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 ZNF571Q7Z3V5 609 aaPredicted RBP27.24■■□□□ 1.95
NME3-208ENST00000565379 ARHGAP18Q8N392 663 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 SCAMP5Q8TAC9 235 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 NKD2Q969F2 451 aaPredicted RBP27.24■■□□□ 1.95
NME3-208ENST00000565379 RSPRY1Q96DX4 576 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 ASB16Q96NS5 453 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 ST7Q9NRC1 585 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 SEPT11Q9NVA2 429 aaKnown RBP27.24■■□□□ 1.95
NME3-208ENST00000565379 MTF2Q9Y483 593 aaPredicted RBP27.24■■□□□ 1.95
NME3-208ENST00000565379 CFAP54Q96N23 3096 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 MYH10P35580 1976 aa27.24■■□□□ 1.95
NME3-208ENST00000565379 A0A1W2PRU2 124 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 UNGP13051 313 aaPredicted RBP27.23■■□□□ 1.95
NME3-208ENST00000565379 CD72P21854 359 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 GABRR2P28476 465 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 PSEN1P49768 467 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 RGS7P49802 495 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 GSDMDP57764 484 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 CENPCQ03188 943 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 MLF2Q15773 248 aaPredicted RBP27.23■■□□□ 1.95
NME3-208ENST00000565379 CLEC16AQ2KHT3 1053 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 PM20D1Q6GTS8 502 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 GPRIN1Q7Z2K8 1008 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 ZDHHC17Q8IUH5 632 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 STKLD1Q8NE28 680 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 IRGQQ8WZA9 623 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 SYNCQ9H7C4 482 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 IL21Q9HBE4 155 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 TRPM5Q9NZQ8 1165 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 CYTH4Q9UIA0 394 aa27.23■■□□□ 1.95
NME3-208ENST00000565379 F5P12259 2224 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 ZBED1O96006 694 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 F11P03951 625 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 GZMAP12544 262 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 PFKLP17858 780 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 DDX6P26196 483 aaKnown RBP eCLIP27.22■■□□□ 1.95
NME3-208ENST00000565379 NSFP46459 744 aaKnown RBP27.22■■□□□ 1.95
NME3-208ENST00000565379 ADIGQ0VDE8 80 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 TAF10Q12962 218 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 MAPK8IP2Q13387 824 aaPredicted RBP27.22■■□□□ 1.95
NME3-208ENST00000565379 ANGPT1Q15389 498 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 SLC44A4Q53GD3 710 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 ARHGAP15Q53QZ3 475 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 SNX30Q5VWJ9 437 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 NAA35Q5VZE5 725 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 WDR59Q6PJI9 974 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 MON1AQ86VX9 555 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 ERICH1Q86X53 443 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 ELSPBP1Q96BH3 223 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 TLR8Q9NR97 1041 aaKnown RBP27.22■■□□□ 1.95
NME3-208ENST00000565379 DLGAP2Q9P1A6 1054 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 ARHGAP20Q9P2F6 1191 aa27.22■■□□□ 1.95
NME3-208ENST00000565379 PATJQ8NI35 1801 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 LCP1P13796 627 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 STARD6P59095 220 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 IFRD2Q12894 506 aaPredicted RBP27.21■■□□□ 1.95
NME3-208ENST00000565379 VITQ6UXI7 678 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 GAREM2Q75VX8 874 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 SPC24Q8NBT2 197 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 ZSCAN18Q8TBC5 510 aaPredicted RBP27.21■■□□□ 1.95
NME3-208ENST00000565379 MRPS31Q92665 395 aaKnown RBP27.21■■□□□ 1.95
NME3-208ENST00000565379 CPXM1Q96SM3 734 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 PCDHB18PQ96TA0 734 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 TRIM62Q9BVG3 475 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 ATXN3LQ9H3M9 355 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 CACNA1IQ9P0X4 2223 aa27.21■■□□□ 1.95
NME3-208ENST00000565379 SHISA7A6NL88 538 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 GABRB2P47870 512 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 ACAD10Q6JQN1 1059 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 PHF13Q86YI8 300 aaPredicted RBP27.2■■□□□ 1.94
NME3-208ENST00000565379 PJA1Q8NG27 643 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 SLC30A5Q8TAD4 765 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 CPA5Q8WXQ8 436 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 SMARCD2Q92925 531 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 C18orf8Q96DM3 657 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.2■■□□□ 1.94
NME3-208ENST00000565379 ULBP1Q9BZM6 244 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 DEF6Q9H4E7 631 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 SLITRK6Q9H5Y7 841 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 ZFP14Q9HCL3 533 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 STRIP2Q9ULQ0 834 aa27.2■■□□□ 1.94
NME3-208ENST00000565379 SPTBN4Q9H254 2564 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 E5RJQ4 531 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 DDX3XO00571 662 aaKnown RBP eCLIP27.19■■□□□ 1.943e-7■■■■■ 28.4
NME3-208ENST00000565379 USP17L7P0C7H9 530 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 ZDHHC11BP0C7U3 371 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 MMP8P22894 467 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 TUBP50607 506 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 GOLGA8FQ08AF8 430 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 GOLGA8DPQ0D2H9 430 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 PTPN20Q4JDL3 420 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 TADA2BQ86TJ2 420 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 GOLGA1Q92805 767 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 CCDC42Q96M95 316 aa27.19■■□□□ 1.94
NME3-208ENST00000565379 CDK5RAP1Q96SZ6 601 aaKnown RBP27.19■■□□□ 1.94
NME3-208ENST00000565379 DDX23Q9BUQ8 820 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms