RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 E2F8A0AVK6 867 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 TULP2O00295 520 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 LILRB5O75023 590 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 ADH1CP00326 375 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 AFPP02771 609 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 HMBSP08397 361 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 ADH5P11766 374 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 TBXAS1P24557 533 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 TUBP50607 506 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 TKTL1P51854 596 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 SLC8A3P57103 927 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 PDE4CQ08493 712 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 GAB4Q2WGN9 574 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 C2orf27AQ580R0 203 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 RHBDF2Q6PJF5 856 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 SASS6Q6UVJ0 657 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 SCD5Q86SK9 330 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 MIB1Q86YT6 1006 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 IRF2BP1Q8IU81 584 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 TRIM59Q8IWR1 403 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 NDRG1Q92597 394 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 NELL1Q92832 810 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 FAXDC2Q96IV6 333 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 KLF16Q9BXK1 252 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 FAM126AQ9BYI3 521 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 ZDHHC4Q9NPG8 344 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 RAB23Q9ULC3 237 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 CFAP47Q6ZTR5 3102 aa14.34□□□□□ -0.11
VPS9D1-204ENST00000565023 EML5Q05BV3 1969 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 PIK3R2O00459 728 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 ATG13O75143 517 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CCDC192P0DO97 292 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 RALAP11233 206 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 BRD2P25440 801 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 BCAT1P54687 386 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 GOLGA8FQ08AF8 430 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 GOLGA8DPQ0D2H9 430 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 EFEMP1Q12805 493 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CAVIN1Q6NZI2 390 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 MAMSTRQ6ZN01 415 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 TPGS1Q6ZTW0 290 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CEP68Q76N32 757 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 LONP2Q86WA8 852 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CCDC33Q8N5R6 958 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 UBR7Q8N806 425 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 EHBP1Q8NDI1 1231 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 RUBCNQ92622 972 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CNOT6LQ96LI5 555 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 ULBP1Q9BZM6 244 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 LRRC4Q9HBW1 653 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 PNPLA8Q9NP80 782 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 CYLDQ9NQC7 956 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 ANO10Q9NW15 660 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 LSM7Q9UK45 103 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 FRYLO94915 3013 aa14.33□□□□□ -0.12
VPS9D1-204ENST00000565023 MYO18AQ92614 2054 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 RNF225M0QZC1 329 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 PMM2O15305 246 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 HRO43593 1189 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 APODP05090 189 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 VDRP11473 427 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 LCP1P13796 627 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 TIE1P35590 1138 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 RGS7P49802 495 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 GAD2Q05329 585 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 BST2Q10589 180 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 FBXO43Q4G163 708 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 BTBD8Q5XKL5 378 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 TMEM25Q86YD3 366 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 RBBP8NLQ8NC74 664 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 LMO3Q8TAP4 145 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 TFAP2BQ92481 460 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 BHMTQ93088 406 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 PNKPQ96T60 521 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 CRACR2AQ9BSW2 395 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 INTS2Q9H0H0 1204 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 EPC1Q9H2F5 836 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 THAP9Q9H5L6 903 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 ARHGEF4Q9NR80 690 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 DNMT3LQ9UJW3 386 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 EP300Q09472 2414 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-204ENST00000565023 SDK1Q7Z5N4 2213 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 NEDD8-MDP1E9PL57 170 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 K7EQS6 105 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 M0QYV0 167 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 O00370 1275 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 XPO1O14980 1071 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 P4HA2O15460 535 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms