RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 E5RJQ4 531 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 GCATO75600 419 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 A1BGP04217 495 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 CHRM5P08912 532 aaPredicted RBP3.65□□□□□ -1.83
CHD9-211ENST00000564600 ATF3P18847 181 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 YY1P25490 414 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 IL1R2P27930 398 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 HOXD9P28356 352 aaPredicted RBP3.65□□□□□ -1.83
CHD9-211ENST00000564600 TKTP29401 623 aaKnown RBP3.65□□□□□ -1.83
CHD9-211ENST00000564600 HTR7P34969 479 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 PIK3CBP42338 1070 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 COPAP53621 1224 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 MEX3CQ5U5Q3 659 aaKnown RBP3.65□□□□□ -1.83
CHD9-211ENST00000564600 KLHDC7AQ5VTJ3 777 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 MIS18BP1Q6P0N0 1132 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 ANKRD13AQ8IZ07 590 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 ADAMTS18Q8TE60 1221 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 EDC3Q96F86 508 aaKnown RBP3.65□□□□□ -1.83
CHD9-211ENST00000564600 VPS16Q9H269 839 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 GJB4Q9NTQ9 266 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 ELOVL5Q9NYP7 299 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 TFCP2L1Q9NZI6 479 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 CORO2BQ9UQ03 480 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 HPSEQ9Y251 543 aa3.65□□□□□ -1.83
CHD9-211ENST00000564600 GOLGA6CA6NDK9 693 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 GOLGA6BA6NDN3 693 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 UBE2Q2LH0YL09 131 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 MGEA5O60502 916 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 PRAMEF2O60811 474 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 USP1O94782 785 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 MBPP02686 304 aaPredicted RBP3.64□□□□□ -1.83
CHD9-211ENST00000564600 GOLGA6DP0CG33 693 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 RGS19P49795 217 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 MTHFSP49914 203 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 GPC5P78333 572 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 SLC14A1Q13336 389 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 LARS2Q15031 903 aaKnown RBP3.64□□□□□ -1.83
CHD9-211ENST00000564600 RABEP1Q15276 862 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 CERKLQ49MI3 558 aaPredicted RBP3.64□□□□□ -1.83
CHD9-211ENST00000564600 CLEC9AQ6UXN8 241 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 ZNF813Q6ZN06 617 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 YAF2Q8IY57 180 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 MAP4K1Q92918 833 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 PHKBQ93100 1093 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 CCDC17Q96LX7 622 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 HIST1H2AAQ96QV6 131 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 GOLGA6AQ9NYA3 693 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 ZNF212Q9UDV6 495 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 CAPN11Q9UMQ6 739 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 PAXBP1Q9Y5B6 917 aa3.64□□□□□ -1.83
CHD9-211ENST00000564600 C16orf96A6NNT2 1141 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 CLIC1O00299 241 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 PPEF2O14830 753 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 FYB1O15117 783 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 PARNO95453 639 aaKnown RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 ZNF268Q14587 947 aaPredicted RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 MFSD13AQ14CX5 517 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 PPP4R4Q6NUP7 873 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 TMEM65Q6PI78 240 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 RANBP10Q6VN20 620 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 ZNF517Q6ZMY9 492 aaPredicted RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 DCDC5Q6ZRR9 648 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 RAB11FIP4Q86YS3 637 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 LIX1LQ8IVB5 337 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 DENND1AQ8TEH3 1009 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 FYTTD1Q96QD9 318 aaKnown RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 MLXIPLQ9NP71 852 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 PRDM11Q9NQV5 511 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 DDX21Q9NR30 783 aaKnown RBP eCLIP3.63□□□□□ -1.83
CHD9-211ENST00000564600 DNAJB11Q9UBS4 358 aa3.63□□□□□ -1.83
CHD9-211ENST00000564600 RGS17Q9UGC6 210 aaPredicted RBP3.63□□□□□ -1.83
CHD9-211ENST00000564600 AQP7P3A6NL99 342 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 BTBD19C9JJ37 291 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TMEM232C9JQI7 657 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 H3BNC9 293 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 M0R3H8 397 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 KPNA5O15131 536 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TMPRSS11DO60235 418 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 CBFA2T3O75081 653 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 ARP10275 920 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 CYP19A1P11511 503 aaPredicted RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 SLC5A1P13866 664 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 FOXG1P55316 489 aaPredicted RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 YPEL5P62699 121 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 CFHR3Q02985 330 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 ZNF543Q08ER8 600 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 MTAPQ13126 283 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 KCNB1Q14721 858 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 TMTC4Q5T4D3 741 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 RNF44Q7L0R7 432 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 DGKHQ86XP1 1220 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 KRT78Q8N1N4 520 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 RNF152Q8N8N0 203 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 NRACQ8N912 160 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 OSR1Q8TAX0 266 aaPredicted RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 STRBPQ96SI9 672 aaKnown RBP3.62□□□□□ -1.83
CHD9-211ENST00000564600 BTBD1Q9H0C5 482 aa3.62□□□□□ -1.83
CHD9-211ENST00000564600 FAM83DQ9H4H8 585 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms