RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RSC1A1Q92681 617 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 RSPRY1Q96DX4 576 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 PBKQ96KB5 322 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 NUDT22Q9BRQ3 303 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 MMRN2Q9H8L6 949 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 TRIM36Q9NQ86 728 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 FSCN3Q9NQT6 498 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 SRP68Q9UHB9 627 aaKnown RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 SH2B3Q9UQQ2 575 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 WDR27A2RRH5 827 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 OVOL3O00110 214 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 TAF5LO75529 589 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 WDR47O94967 919 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 ZFXP17010 805 aaPredicted RBP5.41□□□□□ -1.54
LINC00560-201ENST00000564593 PNLIPRP1P54315 467 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 EIF4A1P60842 406 aaKnown RBP5.41□□□□□ -1.54
LINC00560-201ENST00000564593 CSHL1Q14406 222 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 TXNRD1Q16881 649 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 NBPF8Q3BBV2 869 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 KAZNQ674X7 775 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 DPY19L3Q6ZPD9 716 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 SLC44A2Q8IWA5 706 aaPredicted RBP5.41□□□□□ -1.54
LINC00560-201ENST00000564593 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 SCAMP5Q8TAC9 235 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 RFKQ969G6 155 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 ZNF341Q9BYN7 854 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 SAYSD1Q9NPB0 183 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 PRDM8Q9NQV8 689 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 KIF17Q9P2E2 1029 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 GTF2A1LQ9UNN4 478 aa5.41□□□□□ -1.54
LINC00560-201ENST00000564593 DHHO43323 396 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 CBFA2T3O75081 653 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 PMPCBO75439 489 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 PBX1P40424 430 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 MAPK9P45984 424 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 ST3GAL2Q16842 350 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 TMEM196Q5HYL7 178 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 PLAC9Q5JTB6 97 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 KIAA0895LQ68EN5 471 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 ZSCAN31Q96LW9 406 aaPredicted RBP5.4□□□□□ -1.55
LINC00560-201ENST00000564593 CYP4F11Q9HBI6 524 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 MAST3O60307 1309 aa5.4□□□□□ -1.55
LINC00560-201ENST00000564593 AP4M1O00189 453 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 KIAA0355O15063 1070 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 PRKCBP05771 671 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 HKR1P10072 659 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 MAKP20794 623 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 DRD1P21728 446 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 CST5P28325 142 aaPredicted RBP5.39□□□□□ -1.55
LINC00560-201ENST00000564593 GKP32189 559 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 TPTEP56180 551 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 SUMO2P61956 95 aaKnown RBP5.39□□□□□ -1.55
LINC00560-201ENST00000564593 MTAPQ13126 283 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 BTBD16Q32M84 506 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 ANKRD45Q5TZF3 282 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 MOGAT3Q86VF5 341 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 VPS50Q96JG6 964 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 PRR25Q96S07 402 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 EIF3CQ99613 913 aaKnown RBP5.39□□□□□ -1.55
LINC00560-201ENST00000564593 DDX23Q9BUQ8 820 aaKnown RBP5.39□□□□□ -1.55
LINC00560-201ENST00000564593 BRD8Q9H0E9 1235 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 TAF1DQ9H5J8 278 aaPredicted RBP5.39□□□□□ -1.55
LINC00560-201ENST00000564593 ARHGEF3Q9NR81 526 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 SAGE1Q9NXZ1 904 aa5.39□□□□□ -1.55
LINC00560-201ENST00000564593 SPRY2O43597 315 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 CER1O95813 267 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 DLDP09622 509 aaKnown RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 CREB1P16220 341 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 GSTM5P46439 218 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 AVPR1BP47901 424 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 E2F1Q01094 437 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 CYP1B1Q16678 543 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 ADCK5Q3MIX3 580 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 NFRKBQ6P4R8 1299 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 PARS2Q7L3T8 475 aaKnown RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 RAB11FIP2Q7L804 512 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 ZNF551Q7Z340 670 aaPredicted RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 SIRT6Q8N6T7 355 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 WDYHV1Q96HA8 205 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 TRAPPC9Q96Q05 1148 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 SEPSECSQ9HD40 501 aaKnown RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 RRN3Q9NYV6 651 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 LRIT1Q9P2V4 623 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 DAPP1Q9UN19 280 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 GABRQQ9UN88 632 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 A8MVJ9 347 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 CES2O00748 559 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 PPP6R2O75170 966 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 FAM155BO75949 473 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 URI1O94763 535 aaPredicted RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 DGKQP52824 942 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 PRKAA2P54646 552 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 MRPS35P82673 323 aaKnown RBP5.38□□□□□ -1.55
LINC00560-201ENST00000564593 TAP1Q03518 808 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 MPP3Q13368 585 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 BFSP2Q13515 415 aa5.38□□□□□ -1.55
LINC00560-201ENST00000564593 RPS6KA2Q15349 733 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms