RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 BCAT1P54687 386 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 SLC8A3P57103 927 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 SIM2Q14190 667 aaPredicted RBP26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 C2orf27AQ580R0 203 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 RRAGAQ7L523 313 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 NAT16Q8N8M0 369 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 UBA3Q8TBC4 463 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 HESX1Q9UBX0 185 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 DNMT3LQ9UJW3 386 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 PCDHB4Q9Y5E5 795 aa26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.59■■□□□ 1.85
AC009041.3-201ENST00000564390 EP300Q09472 2414 aaPredicted RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 O00370 1275 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 GNA14O95837 355 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 AFPP02771 609 aaKnown RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 TKTL1P51854 596 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 MARSP56192 900 aaKnown RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 GOLGA8FQ08AF8 430 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 GOLGA8DPQ0D2H9 430 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 BST2Q10589 180 aaKnown RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 CETN1Q12798 172 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 DMC1Q14565 340 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 RAB41Q5JT25 222 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 TMEM25Q86YD3 366 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 USP33Q8TEY7 942 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 TFAP2BQ92481 460 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 NDRG1Q92597 394 aaKnown RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 ACDQ96AP0 544 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 PNKPQ96T60 521 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 ULBP1Q9BZM6 244 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 ARHGEF4Q9NR80 690 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 SPHK2Q9NRA0 654 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 RWDD2AQ9UIY3 292 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 RASAL2Q9UJF2 1139 aa26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 LSM7Q9UK45 103 aaKnown RBP26.58■■□□□ 1.85
AC009041.3-201ENST00000564390 XPO1O14980 1071 aaKnown RBP26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 P4HA2O15460 535 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 KAT7O95251 611 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 RALAP11233 206 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 VDRP11473 427 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 PSEN1P49768 467 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 GAD2Q05329 585 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 ANO4Q32M45 955 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 KLHDC10Q6PID8 442 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 HTR3DQ70Z44 454 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 CEP68Q76N32 757 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 SYT13Q7L8C5 426 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 MED15Q96RN5 788 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 UBXN6Q9BZV1 441 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 INTS2Q9H0H0 1204 aaKnown RBP26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 CLSTN2Q9H4D0 955 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 GMEB2Q9UKD1 530 aa26.57■■□□□ 1.84
AC009041.3-201ENST00000564390 RNF225M0QZC1 329 aaPredicted RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 HOXC11O43248 304 aaPredicted RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 APODP05090 189 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 HMBSP08397 361 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 CCDC192P0DO97 292 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 EIF2DP41214 584 aaKnown RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 EFEMP1Q12805 493 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 BTBD8Q5XKL5 378 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 ETFBKMTQ8IXQ9 262 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 CCDC33Q8N5R6 958 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 RBBP8NLQ8NC74 664 aaPredicted RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 SECISBP2LQ93073 1101 aaKnown RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 CNOT6LQ96LI5 555 aaKnown RBP26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 ZDHHC4Q9NPG8 344 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 CLIC5Q9NZA1 410 aa26.56■■□□□ 1.84
AC009041.3-201ENST00000564390 EML5Q05BV3 1969 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 STC2O76061 302 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 ZBED1O96006 694 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 BRD2P25440 801 aaKnown RBP26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 CNR2P34972 360 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 YWHAGP61981 247 aaKnown RBP eCLIP26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 ADIGQ0VDE8 80 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 LAIR1Q6GTX8 287 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 TPGS1Q6ZTW0 290 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 BHLHA9Q7RTU4 235 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 TADA2BQ86TJ2 420 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 CREBRFQ8IUR6 639 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 PHTF2Q8N3S3 785 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 EHBP1Q8NDI1 1231 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 ZSWIM1Q9BR11 485 aa26.55■■□□□ 1.84
AC009041.3-201ENST00000564390 NEDD8-MDP1E9PL57 170 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 TRIM24O15164 1050 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 TULP3O75386 442 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 FGFR1OPO95684 399 aaKnown RBP26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 PAEPP09466 180 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 TIE1P35590 1138 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 PLA2G4AP47712 749 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 EMC10Q5UCC4 262 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 RSRC2Q7L4I2 434 aaKnown RBP26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 ARHGAP18Q8N392 663 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 KREMEN1Q96MU8 473 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 LRRC4Q9HBW1 653 aa26.54■■□□□ 1.84
AC009041.3-201ENST00000564390 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.53■■□□□ 1.84
AC009041.3-201ENST00000564390 M0QYV0 167 aa26.53■■□□□ 1.84
AC009041.3-201ENST00000564390 RPP40O75818 363 aaKnown RBP26.53■■□□□ 1.84
AC009041.3-201ENST00000564390 APBB3O95704 486 aa26.53■■□□□ 1.84
AC009041.3-201ENST00000564390 SETSIPP0DME0 302 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms