RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RAD54LQ92698 747 aa16.93■□□□□ 0.3
RNF40-205ENST00000563909 ASB7Q9H672 318 aa16.93■□□□□ 0.3
RNF40-205ENST00000563909 GMIPQ9P107 970 aa16.93■□□□□ 0.3
RNF40-205ENST00000563909 NPHP3-ACAD11A0A0J9YXS1 232 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 HNF1BP35680 557 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 STAT6P42226 847 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 GRK6P43250 576 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 CSNK1EP49674 416 aaKnown RBP16.92■□□□□ 0.3
RNF40-205ENST00000563909 ACOT2P49753 483 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 SLC12A3P55017 1021 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 CLDN6P56747 220 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 TLE3Q04726 772 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 ANO4Q32M45 955 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 DCAF12L1Q5VU92 463 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 CLEC17AQ6ZS10 378 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 PDILTQ8N807 584 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 IQUBQ8NA54 791 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 ENGASEQ8NFI3 743 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 SNIP1Q8TAD8 396 aaKnown RBP16.92■□□□□ 0.3
RNF40-205ENST00000563909 LARP4BQ92615 738 aaKnown RBP16.92■□□□□ 0.3
RNF40-205ENST00000563909 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
RNF40-205ENST00000563909 GABRG3Q99928 467 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 BLOC1S4Q9NUP1 217 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 WSB2Q9NYS7 404 aaPredicted RBP16.92■□□□□ 0.3
RNF40-205ENST00000563909 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 COL6A6A6NMZ7 2263 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 USP9XQ93008 2570 aaPredicted RBP16.92■□□□□ 0.3
RNF40-205ENST00000563909 KNTC1P50748 2209 aa16.92■□□□□ 0.3
RNF40-205ENST00000563909 HCRTO43612 131 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 HUS1O60921 280 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 OLFM2O95897 454 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 MAGEA11P43364 429 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 CCDC173Q0VFZ6 552 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 KIF19Q2TAC6 998 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 DDX42Q86XP3 938 aaKnown RBP eCLIP16.91■□□□□ 0.3
RNF40-205ENST00000563909 FGF11Q92914 225 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 KCNN1Q92952 543 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 SPATA17Q96L03 361 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
RNF40-205ENST00000563909 EIF2B4Q9UI10 523 aaKnown RBP16.91■□□□□ 0.3
RNF40-205ENST00000563909 UBR5O95071 2799 aaPredicted RBP16.9■□□□□ 0.3
RNF40-205ENST00000563909 A0A087X0B3 334 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 E2F8A0AVK6 867 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 METTL12A8MUP2 240 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
RNF40-205ENST00000563909 HOXC11O43248 304 aaPredicted RBP16.9■□□□□ 0.3
RNF40-205ENST00000563909 PIGRP01833 764 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 MBL2P11226 248 aaPredicted RBP16.9■□□□□ 0.3
RNF40-205ENST00000563909 GRIK1P39086 918 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 MCM6Q14566 821 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 GRAMD4Q6IC98 578 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 TMEM25Q86YD3 366 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 TMEM86AQ8N2M4 240 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 OTUB2Q96DC9 234 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 WBP1Q96G27 269 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 SEMA4CQ9C0C4 833 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 FTSJ1Q9UET6 329 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 SNX11Q9Y5W9 270 aa16.9■□□□□ 0.3
RNF40-205ENST00000563909 FAM237AA0A1B0GTK4 181 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 A0A1B0GVL5 298 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 WASH3PC4AMC7 463 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 K7ENM7 598 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 KCNK3O14649 394 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 ATP2C2O75185 946 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 OAS1P00973 400 aaKnown RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 PFKFB1P16118 471 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 SCP2P22307 547 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 PNPLA4P41247 253 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 IL12RB1P42701 662 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 PPP3CCP48454 512 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 AFF3P51826 1226 aaKnown RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 TARDBPQ13148 414 aaKnown RBP eCLIP16.89■□□□□ 0.29
RNF40-205ENST00000563909 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 RTP5Q14D33 572 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 C4orf50Q6ZRC1 276 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 OSTM1Q86WC4 334 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 SPACA3Q8IXA5 215 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 C1orf216Q8TAB5 229 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 SCFD1Q8WVM8 642 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 DHX58Q96C10 678 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 TMEM176AQ96HP8 235 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 NRSN2Q9GZP1 204 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 MAGEF1Q9HAY2 307 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 SPHK2Q9NRA0 654 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 DNAJC17Q9NVM6 304 aaKnown RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 MAGEC2Q9UBF1 373 aaPredicted RBP16.89■□□□□ 0.29
RNF40-205ENST00000563909 USP25Q9UHP3 1055 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 474.8 ms