RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MDC1Q14676 2089 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 TRIM24O15164 1050 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 TCEA3O75764 348 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 IGHV4-34P06331 123 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 CSH1P0DML2 217 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 CSH2P0DML3 217 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 CD38P28907 300 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 LTBQ06643 244 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 DHX8Q14562 1220 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 BTBD8Q5XKL5 378 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 ALKAL1Q6UXT8 129 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 CYB5R4Q7L1T6 521 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 TMC6Q7Z403 805 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 USP37Q86T82 979 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 HDAC11Q96DB2 347 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 TRMT2BQ96GJ1 504 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 MAP3K14Q99558 947 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 LZTS2Q9BRK4 669 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 PCDHB11Q9Y5F2 797 aa11.47□□□□□ -0.57
HDGFL3-204ENST00000563790 ZANQ9Y493 2812 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 LY6G6EA0A0G2JKS1 128 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 A0A1W2PPC4 97 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 A0A1W2PR77 199 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 PRRT4C9JH25 899 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 JAK2O60674 1132 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 CALM1P0DP23 149 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 CALM2P0DP24 149 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 CALM3P0DP25 149 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 HAPLN1P10915 354 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 PYGBP11216 843 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 NR1D1P20393 614 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 CAPN3P20807 821 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 ITGA3P26006 1051 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 COPAP53621 1224 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 NXPH1P58417 271 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 PSMC5P62195 406 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 FAM187BQ17R55 369 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 HS1BP3Q53T59 392 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 OVOS1Q6IE37 1185 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 ARMCX5Q6P1M9 558 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 HEATR3Q7Z4Q2 680 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 SLC25A45Q8N413 288 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 ARRDC3Q96B67 414 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 MYRFLQ96LU7 910 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 FAM227BQ96M60 508 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 MTRQ99707 1265 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 USP29Q9HBJ7 922 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 DAXXQ9UER7 740 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 MAGED2Q9UNF1 606 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 STON1Q9Y6Q2 735 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 U3KQA8 63 aa11.46□□□□□ -0.57
HDGFL3-204ENST00000563790 SONP18583 2426 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 MSH4O15457 936 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 GRID2O43424 1007 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 CIITAP33076 1130 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 HSPA4P34932 840 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 UGT1A5P35504 534 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 PDE6CP51160 858 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 PDX1P52945 283 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 SLC39A12Q504Y0 691 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 TCTN3Q6NUS6 607 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 B3GNT9Q6UX72 402 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 ZNF276Q8N554 614 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 SLC5A5Q92911 643 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 SEMA6CQ9H3T2 930 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 XPNPEP1Q9NQW7 623 aa11.45□□□□□ -0.58
HDGFL3-204ENST00000563790 TTC41PQ6P2S7 1318 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 K7EM74 188 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 TLR4O00206 839 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 SCAMP3O14828 347 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 PRICKLE3O43900 615 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 C7P10643 843 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 PFKLP17858 780 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 HARS2P49590 506 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 ADCY7P51828 1080 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 ENPP2Q13822 863 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 DCAF4L1Q3SXM0 396 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 CACUL1Q86Y37 369 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms