RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CHAC2Q8WUX2 184 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 EZH1Q92800 747 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 NINJ1Q92982 152 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SLC39A13Q96H72 371 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 IGSF21Q96ID5 467 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 HPDLQ96IR7 371 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 ZNF560Q96MR9 790 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 FAM193BQ96PV7 902 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 ERGIC2Q96RQ1 377 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 CRACR2AQ9BSW2 395 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 PI4K2AQ9BTU6 479 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GPR62Q9BZJ7 368 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 XPO4Q9C0E2 1151 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 INTS2Q9H0H0 1204 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 SDCBP2Q9H190 292 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 MIR1-1HGQ9H1L0 117 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GANQ9H2C0 597 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 ATXN3LQ9H3M9 355 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 RAB20Q9NX57 234 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GDAP2Q9NXN4 497 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 IFNKQ9P0W0 207 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 GCNT4Q9P109 453 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 STOML1Q9UBI4 398 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 AJAP1Q9UKB5 411 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 L1RE1Q9UN81 338 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
HERPUD1-207ENST00000563781 REV3LO60673 3130 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 CCDC163A0A0D9SF12 145 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 FAM221AA4D161 298 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 EPOPA6NHQ4 379 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 C5orf67F2Z3F1 127 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 M0QZQ0 153 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 PES1O00541 588 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 EPHB6O15197 1021 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TSPAN6O43657 245 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 FGF18O76093 207 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 NOL4O94818 638 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ASMTLO95671 621 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SERPINC1P01008 464 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ALDH2P05091 517 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 KRT19P08727 400 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 PAX3P23760 479 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 DNAJB1P25685 340 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 PON1P27169 355 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TKTP29401 623 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ATICP31939 592 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 CTNNB1P35222 781 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 PPM1AP35813 382 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 BMPR1AP36894 532 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 PNPLA4P41247 253 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 NOP14P78316 857 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TRPC3Q13507 836 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 MPP2Q14168 576 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 NR1I3Q14994 352 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SYCP1Q15431 976 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 EXOC3L4Q17RC7 722 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SGSM1Q2NKQ1 1148 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ZNF699Q32M78 642 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SV2CQ496J9 727 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 FUT10Q6P4F1 479 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 GJB7Q6PEY0 223 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TRIM65Q6PJ69 517 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 LRFN4Q6PJG9 635 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SCARA5Q6ZMJ2 495 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 GBP6Q6ZN66 633 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 OSTM1Q86WC4 334 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 C12orf40Q86WS4 652 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 UBR7Q8N806 425 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ANKRD20A12PQ8NF67 263 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 GATAD2BQ8WXI9 593 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TAF4BQ92750 862 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 KAT5Q92993 513 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TIFAQ96CG3 184 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SENP8Q96LD8 212 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 KREMEN1Q96MU8 473 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SAMD11Q96NU1 681 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 NT5C1BQ96P26 610 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 HERC2P3Q9BVR0 1158 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 LSM14BQ9BX40 385 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ZNF700Q9H0M5 742 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 KCNF1Q9H3M0 494 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SMYD3Q9H7B4 428 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 CAAP1Q9H8G2 361 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ST7Q9NRC1 585 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SPG21Q9NZD8 308 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 MSRAQ9UJ68 235 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ZMYM5Q9UJ78 669 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 MCM8Q9UJA3 840 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 ADAM28Q9UKQ2 775 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 NME7Q9Y5B8 376 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 COMMD10Q9Y6G5 202 aa5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 FNDC1Q4ZHG4 1894 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-207ENST00000563781 SF3B1O75533 1304 aaKnown RBP eCLIP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms