RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SHANK3Q9BYB0 1731 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 A6NNZ2 444 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 NDUFB7P17568 137 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 GPD1P21695 349 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 TMF1P82094 1093 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 CNGA2Q16280 664 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 ARHGEF25Q86VW2 580 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 COL23A1Q86Y22 540 aaPredicted RBP5.88□□□□□ -1.47
LINC00254-201ENST00000563416 TTC17Q96AE7 1141 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 APIPQ96GX9 242 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 HAPLN3Q96S86 360 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 KLK15Q9H2R5 256 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 SMURF2Q9HAU4 748 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 SERHLQ9NQF3 203 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 ARHGEF3Q9NR81 526 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 SACM1LQ9NTJ5 587 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 AFF4Q9UHB7 1163 aaKnown RBP5.88□□□□□ -1.47
LINC00254-201ENST00000563416 COX11Q9Y6N1 276 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 TTC21BQ7Z4L5 1316 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 RGS12O14924 1447 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 LRRC37A3O60309 1634 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 RGPD1P0DJD0 1748 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 PEAK1Q9H792 1746 aa5.88□□□□□ -1.47
LINC00254-201ENST00000563416 TNS1Q9HBL0 1735 aaKnown RBP5.88□□□□□ -1.47
LINC00254-201ENST00000563416 KAT6AQ92794 2004 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 C1RP00736 705 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 EBLN1P0CF75 366 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 MYF5P13349 255 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 ZKSCAN1P17029 563 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 WT1P19544 449 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PEX2P28328 305 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PDE6CP51160 858 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PRKAG1P54619 331 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 MYO1EQ12965 1108 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PLA1AQ53H76 456 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF362Q5T0B9 420 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 ATG4AQ8WYN0 398 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 RAPGEF4Q8WZA2 1011 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 SPSB4Q96A44 273 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 NMD3Q96D46 503 aaKnown RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF287Q9HBT7 754 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 CPNE5Q9HCH3 593 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 TRMT13Q9NUP7 481 aaKnown RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 ASB6Q9NWX5 421 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 PTGFRNQ9P2B2 879 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 CPNE7Q9UBL6 633 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 KIAA0232Q92628 1395 aa5.87□□□□□ -1.47
LINC00254-201ENST00000563416 COL5A2P05997 1499 aaPredicted RBP5.87□□□□□ -1.47
LINC00254-201ENST00000563416 TRIM43BA6NCK2 446 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 hCG_1984214I3L0E3 225 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 PROP1O75360 226 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 IGLV2-14P01704 120 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 PDHA1P08559 390 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 HSPA5P11021 654 aaKnown RBP5.86□□□□□ -1.47
LINC00254-201ENST00000563416 RHCEP18577 417 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 RPL17P18621 184 aaKnown RBP5.86□□□□□ -1.47
LINC00254-201ENST00000563416 KLRC1P26715 233 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 PTH2RP49190 550 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 CCT8P50990 548 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 DGKEP52429 567 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 RHDQ02161 417 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 INSCQ1MX18 579 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 DCAF12L1Q5VU92 463 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 ANKRD16Q6P6B7 361 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 WDR53Q7Z5U6 358 aaPredicted RBP5.86□□□□□ -1.47
LINC00254-201ENST00000563416 DGKHQ86XP1 1220 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF280BQ86YH2 543 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 SMC5Q8IY18 1101 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 TRIM43Q96BQ3 446 aaPredicted RBP5.86□□□□□ -1.47
LINC00254-201ENST00000563416 BHMT2Q9H2M3 363 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 R3HDMLQ9H3Y0 253 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 CXorf36Q9H7Y0 433 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 IL17RBQ9NRM6 502 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 SERTAD4Q9NUC0 356 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 TERF2IPQ9NYB0 399 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 DKK3Q9UBP4 350 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 ST3GAL5Q9UNP4 418 aa5.86□□□□□ -1.47
LINC00254-201ENST00000563416 MRPS17Q9Y2R5 130 aaKnown RBP5.86□□□□□ -1.47
LINC00254-201ENST00000563416 RGPD3A6NKT7 1758 aaPredicted RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 RGPD4Q7Z3J3 1758 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 PYCARD-AS1I3L0S3 204 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 OVOL3O00110 214 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 RASSF9O75901 435 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 CD38P28907 300 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 RBM6P78332 1123 aaKnown RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 TREML2Q5T2D2 321 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 DPY19L2P1Q6NXN4 242 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 MAVSQ7Z434 540 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF804AQ7Z570 1209 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 UNC5CLQ8IV45 518 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 FAM98AQ8NCA5 519 aaKnown RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 SMCR8Q8TEV9 937 aaPredicted RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 OSCP1Q8WVF1 389 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 MAML1Q92585 1016 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 PMM1Q92871 262 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms