RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 TLR8Q9NR97 1041 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-205ENST00000562914 KLK13Q9UKR3 277 aa16.67■□□□□ 0.26
HERPUD1-205ENST00000562914 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
HERPUD1-205ENST00000562914 CACNA1GO43497 2377 aa16.67■□□□□ 0.26
HERPUD1-205ENST00000562914 TLR5O60602 858 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 PPP6R2O75170 966 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 COL9A2Q14055 689 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 ACAP1Q15027 740 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 E2F5Q15329 346 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 WDR45BQ5MNZ6 344 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 FAM173BQ6P4H8 233 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 IPO4Q8TEX9 1081 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 ZNF419Q96HQ0 510 aaPredicted RBP16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 C7orf25Q9BPX7 421 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 CSNK1G1Q9HCP0 422 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 DNAJC17Q9NVM6 304 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 GMIPQ9P107 970 aa16.66■□□□□ 0.26
HERPUD1-205ENST00000562914 SPEGQ15772 3267 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 PCNX2A6NKB5 2137 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 NPC1O15118 1278 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 CLIC2O15247 247 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 NDUFS2O75306 463 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 AP1G2O75843 785 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 CD59P13987 128 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 NDUFV2P19404 249 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 PI4KAP42356 2102 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 CLDN10P78369 228 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 BIRC3Q13489 604 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 STK38Q15208 465 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 KLHDC10Q6PID8 442 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 UNC13DQ70J99 1090 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 METTL3Q86U44 580 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 ZNF516Q92618 1163 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 INTS4Q96HW7 963 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 HSPA12BQ96MM6 686 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 CD248Q9HCU0 757 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
HERPUD1-205ENST00000562914 ATRXP46100 2492 aa16.64■□□□□ 0.26
HERPUD1-205ENST00000562914 PCDH15Q96QU1 1955 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 ZZEF1O43149 2961 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 NEDD8-MDP1E9PL57 170 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 EXOC3O60645 756 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 TYRP14679 529 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 RING1Q06587 406 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 EHHADHQ08426 723 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 EGFLAMQ63HQ2 1017 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 UNC93AQ86WB7 457 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 MIB1Q86YT6 1006 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 RGL4Q8IZJ4 473 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 FUKQ8N0W3 1084 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 LINC00301Q8NCQ3 95 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 TAF4BQ92750 862 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 KLF16Q9BXK1 252 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 PNPLA8Q9NP80 782 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 CYP8B1Q9UNU6 501 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 PCDHB9Q9Y5E1 797 aa16.64■□□□□ 0.25
HERPUD1-205ENST00000562914 PVALEFA0A1B0GWK0 134 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 SPTLC2O15270 562 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 GREM1O60565 184 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 GJB3O75712 270 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 CLSTN1O94985 981 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 RPN1P04843 607 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 IRF1P10914 325 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 DGKGP49619 791 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 CDH8P55286 799 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 NCOA4Q13772 614 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 TRIP6Q15654 476 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 KNOP1Q1ED39 458 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 SGSM1Q2NKQ1 1148 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 NELFCDQ8IXH7 590 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 DHX58Q96C10 678 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 MRGPRX1Q96LB2 322 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 MYOFQ9NZM1 2061 aa16.63■□□□□ 0.25
HERPUD1-205ENST00000562914 WDFY3Q8IZQ1 3526 aa16.62■□□□□ 0.25
HERPUD1-205ENST00000562914 CD6P30203 668 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms