RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 KCTD20Q7Z5Y7 419 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 KRT73Q86Y46 540 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD9-205ENST00000562785 GLIS1Q8NBF1 620 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 COG3Q96JB2 828 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 SNX27Q96L92 541 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 HERPUD2Q9BSE4 406 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 SSX2IPQ9Y2D8 614 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 RTL1A6NKG5 1358 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 KIF24Q5T7B8 1368 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 ZBED9Q6R2W3 1325 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 TTC21BQ7Z4L5 1316 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 ALS2Q96Q42 1657 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
CHD9-205ENST00000562785 IQSEC2Q5JU85 1478 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 SKAP2O75563 359 aaPredicted RBP6.56□□□□□ -1.36
CHD9-205ENST00000562785 PIAS2O75928 621 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 SPDEFO95238 335 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 CSF1RP07333 972 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 C1SP09871 688 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 EGR1P18146 543 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 SCAPQ12770 1279 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 E2F2Q14209 437 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 RAB30Q15771 203 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
CHD9-205ENST00000562785 SPATS1Q496A3 300 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 ICE2Q659A1 982 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 CCDC174Q6PII3 467 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 CRTC1Q6UUV9 634 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 RHOUQ7L0Q8 258 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 NKAPQ8N5F7 415 aaKnown RBP6.56□□□□□ -1.36
CHD9-205ENST00000562785 MUL1Q969V5 352 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 LENG9Q96B70 501 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 FAM136AQ96C01 138 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 FZD1Q9UP38 647 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 NHSL1Q5SYE7 1610 aa6.56□□□□□ -1.36
CHD9-205ENST00000562785 MARF1Q9Y4F3 1742 aaKnown RBP6.56□□□□□ -1.36
CHD9-205ENST00000562785 SLIT3O75094 1523 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 NPHP3Q7Z494 1330 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 UNC119BA6NIH7 251 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 FYB1O15117 783 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 CD3EAPO15446 510 aaKnown RBP6.55□□□□□ -1.36
CHD9-205ENST00000562785 SRGAP2O75044 1071 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 RASAL1O95294 804 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 CSTBP04080 98 aaKnown RBP6.55□□□□□ -1.36
CHD9-205ENST00000562785 HALP42357 657 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 ITGA8P53708 1063 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 PRKAG1P54619 331 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 GUCY1B3Q02153 619 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 GALNT1Q10472 559 aaPredicted RBP6.55□□□□□ -1.36
CHD9-205ENST00000562785 KCNAB1Q14722 419 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 ZACNQ401N2 412 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 TIGD2Q4W5G0 525 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 PRR16Q569H4 304 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 ARL6IP4Q66PJ3 421 aaKnown RBP6.55□□□□□ -1.36
CHD9-205ENST00000562785 MZT2AQ6P582 158 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 TLDC1Q6P9B6 456 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 ARHGEF19Q8IW93 802 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD9-205ENST00000562785 SLC15A3Q8IY34 581 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 FAM9BQ8IZU0 186 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 SPARTQ8N0X7 666 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 NGEFQ8N5V2 710 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 PPP2R3CQ969Q6 453 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 PLEKHG4BQ96PX9 1271 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 AMBRA1Q9C0C7 1298 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD9-205ENST00000562785 TMEM8AQ9HCN3 771 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 TNS3Q68CZ2 1445 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 ARHGEF10O15013 1369 aa6.55□□□□□ -1.36
CHD9-205ENST00000562785 LTBP4Q8N2S1 1624 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 ZNF335Q9H4Z2 1342 aaPredicted RBP6.54□□□□□ -1.36
CHD9-205ENST00000562785 CENPVL1A0A0U1RR11 272 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 hCG_1642624A0A1W2PR95 340 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 SYT5O00445 386 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 NPC1O15118 1278 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 PIP5K1CO60331 668 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 LPXNO60711 386 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 SRGNP10124 158 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 PPP3CBP16298 524 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 MST1P26927 711 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 ATICP31939 592 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 PTGS2P35354 604 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 CHKAP35790 457 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 GRK6P43250 576 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 PDE6CP51160 858 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 GRM1Q13255 1194 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 TP53BP2Q13625 1128 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 ELF2Q15723 593 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 CCDC38Q502W7 563 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 CERCAMQ5T4B2 595 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 MANEALQ5VSG8 457 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 MRNIPQ6NTE8 343 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 ANKRD42Q8N9B4 389 aa6.54□□□□□ -1.36
CHD9-205ENST00000562785 DNAJB14Q8TBM8 379 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms