RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 KIAA1549LQ6ZVL6 1849 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 O00370 1275 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 TRDMT1O14717 391 aaKnown RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 SLC9A3R1O14745 358 aaPredicted RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 NFATC1O95644 943 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 SP9P0CG40 484 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CD19P15391 556 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 GJA4P35212 333 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 BCAT1P54687 386 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 SLC8A3P57103 927 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 AMPD2Q01433 879 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 MTAPQ13126 283 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CCINQ13939 588 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 LRRC32Q14392 662 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CT47A1Q5JQC4 288 aaPredicted RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 RBM43Q6ZSC3 357 aaKnown RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 SEMA4AQ9H3S1 761 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 PRMT8Q9NR22 394 aaPredicted RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 RBM12Q9NTZ6 932 aaKnown RBP12.11□□□□□ -0.47
FANCA-209ENST00000562424 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 CFAP97Q9P2B7 532 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 HESX1Q9UBX0 185 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 FBXO4Q9UKT5 387 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 PCDHB4Q9Y5E5 795 aa12.11□□□□□ -0.47
FANCA-209ENST00000562424 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 A0A1W2PQH9 124 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 E2F8A0AVK6 867 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 GTPBP10A4D1E9 387 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 RNF225M0QZC1 329 aaPredicted RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 XPO1O14980 1071 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 MTIF2P46199 727 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 ZNF132P52740 706 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 PDE4CQ08493 712 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 NR1H3Q13133 447 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 GAS6Q14393 721 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 TMEM196Q5HYL7 178 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 KLHDC10Q6PID8 442 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 LCLAT1Q6UWP7 414 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 SCD5Q86SK9 330 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 ADGRG2Q8IZP9 1017 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 SYNPOQ8N3V7 929 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 TFAP2BQ92481 460 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
FANCA-209ENST00000562424 NACA2Q9H009 215 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
FANCA-209ENST00000562424 TBC1D14Q9P2M4 693 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
FANCA-209ENST00000562424 BHMG1C9JSJ3 638 aaPredicted RBP12.09□□□□□ -0.47
FANCA-209ENST00000562424 TULP2O00295 520 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 TBX18O95935 607 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 CYP17A1P05093 508 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 RARGP13631 454 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 ATP5C1P36542 298 aaKnown RBP12.09□□□□□ -0.47
FANCA-209ENST00000562424 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 CSTF1Q05048 431 aaKnown RBP12.09□□□□□ -0.47
FANCA-209ENST00000562424 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
FANCA-209ENST00000562424 STILQ15468 1287 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 CNGA2Q16280 664 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 EXOC3L4Q17RC7 722 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 PM20D1Q6GTS8 502 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 FSTL4Q6MZW2 842 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 TRIM65Q6PJ69 517 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 GBP6Q6ZN66 633 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 Q6ZS52 159 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 EXOC4Q96A65 974 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
FANCA-209ENST00000562424 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
FANCA-209ENST00000562424 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 NAGPAQ9UK23 515 aa12.09□□□□□ -0.47
FANCA-209ENST00000562424 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
FANCA-209ENST00000562424 SCAMP3O14828 347 aaKnown RBP12.08□□□□□ -0.48
FANCA-209ENST00000562424 MBD3O95983 291 aa12.08□□□□□ -0.48
FANCA-209ENST00000562424 ZBED1O96006 694 aa12.08□□□□□ -0.48
FANCA-209ENST00000562424 LMNAP02545 664 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms