RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 ZNF699Q32M78 642 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 GRAMD4Q6IC98 578 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 PAQR9Q6ZVX9 377 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 TMEM25Q86YD3 366 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 MIB1Q86YT6 1006 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 C12orf56Q8IXR9 622 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 DEFB119Q8N690 84 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 SCFD1Q8WVM8 642 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 HSPA12BQ96MM6 686 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 ZSCAN16Q9H4T2 348 aaPredicted RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 VRTNQ9H8Y1 702 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 DNAJC17Q9NVM6 304 aaKnown RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 HCN2Q9UL51 889 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 ITPR1Q14643 2758 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 IGHV1OR15-9A0A0B4J2B8 117 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 NEDD8-MDP1E9PL57 170 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 TLR5O60602 858 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 AP1G2O75843 785 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 SYPP08247 313 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 TYRP14679 529 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 NDUFV2P19404 249 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 CASP4P49662 377 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 CDH8P55286 799 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 EHHADHQ08426 723 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 GOLGA8FQ08AF8 430 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 GOLGA8DPQ0D2H9 430 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 BIRC3Q13489 604 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 HNRNPDQ14103 355 aaKnown RBP10.86□□□□□ -0.67
BBS4-205ENST00000562219 BMT2Q1RMZ1 405 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 ZNF667Q5HYK9 610 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 EGFLAMQ63HQ2 1017 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 SDE2Q6IQ49 451 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 SLC41A1Q8IVJ1 513 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 CHPFQ8IZ52 775 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 IPO4Q8TEX9 1081 aaKnown RBP10.86□□□□□ -0.67
BBS4-205ENST00000562219 WBP2Q969T9 261 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 DHX58Q96C10 678 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 XPO6Q96QU8 1125 aaKnown RBP10.86□□□□□ -0.67
BBS4-205ENST00000562219 GABRG3Q99928 467 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 BBS2Q9BXC9 721 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 FBXO44Q9H4M3 255 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 TLR8Q9NR97 1041 aaKnown RBP10.86□□□□□ -0.67
BBS4-205ENST00000562219 DNAAF2Q9NVR5 837 aaKnown RBP10.86□□□□□ -0.67
BBS4-205ENST00000562219 MARK1Q9P0L2 795 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 CYP8B1Q9UNU6 501 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 MTMR6Q9Y217 621 aa10.86□□□□□ -0.67
BBS4-205ENST00000562219 FAM221BA6H8Z2 402 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 TRIM24O15164 1050 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 SPTLC2O15270 562 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 GREM1O60565 184 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 PPP6R2O75170 966 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 CD59P13987 128 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 CCDC130P13994 396 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 HOXB3P14651 431 aaPredicted RBP10.85□□□□□ -0.67
BBS4-205ENST00000562219 WASP42768 502 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 AP3M2P53677 418 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 FAM193AP78312 1265 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 CLDN10P78369 228 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 SLC14A1Q13336 389 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 NCOA4Q13772 614 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 ACOT1Q86TX2 421 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 ZMIZ2Q8NF64 920 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 OR2I1PQ8NGU4 316 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 ACOX2Q99424 681 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 SDCBP2Q9H190 292 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 FAM124BQ9H5Z6 455 aaPredicted RBP10.85□□□□□ -0.67
BBS4-205ENST00000562219 CSNK1G1Q9HCP0 422 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 WDR35Q9P2L0 1181 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
BBS4-205ENST00000562219 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
BBS4-205ENST00000562219 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
BBS4-205ENST00000562219 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
BBS4-205ENST00000562219 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 EXOC3O60645 756 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 NDUFS2O75306 463 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 BEST1O76090 585 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 P4HA1P13674 534 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 DGKGP49619 791 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 PGFP49763 221 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 RING1Q06587 406 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
BBS4-205ENST00000562219 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
BBS4-205ENST00000562219 SYCP2LQ5T4T6 812 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms