RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PIK3CBP42338 1070 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 CFHR3Q02985 330 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 ZNF543Q08ER8 600 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 MTAPQ13126 283 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 CLCA4Q14CN2 919 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 LARS2Q15031 903 aaKnown RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 CERKLQ49MI3 558 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 GRHL2Q6ISB3 625 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 WDR75Q8IWA0 830 aaKnown RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 SDR16C5Q8N3Y7 309 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 C12orf76Q8N812 135 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 RNF152Q8N8N0 203 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 MAFAQ8NHW3 353 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 ZNF668Q96K58 619 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 CCDC17Q96LX7 622 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 ZNF48Q96MX3 618 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 FYTTD1Q96QD9 318 aaKnown RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 HIST1H2AAQ96QV6 131 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 NUP62CLQ9H1M0 184 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 NRIP3Q9NQ35 241 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 SNX15Q9NRS6 342 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 TBC1D23Q9NUY8 699 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 SEMA5BQ9P283 1151 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 CHPF2Q9P2E5 772 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 DNAJB11Q9UBS4 358 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 NKX1-2Q9UD57 310 aaPredicted RBP2.81□□□□□ -1.96
CHD9-204ENST00000561869 ZNF212Q9UDV6 495 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 HPSEQ9Y251 543 aa2.81□□□□□ -1.96
CHD9-204ENST00000561869 TMEM232C9JQI7 657 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 KCNQ3O43525 872 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 CBFA2T3O75081 653 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 GCATO75600 419 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 MBPP02686 304 aaPredicted RBP2.8□□□□□ -1.96
CHD9-204ENST00000561869 CD19P15391 556 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 PHKG2P15735 406 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 THBS4P35443 961 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 MTHFSP49914 203 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 GPC5P78333 572 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 DAG1Q14118 895 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 Q4G0T1 1027 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 C4orf46Q504U0 113 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 KLHDC7AQ5VTJ3 777 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 MIS18BP1Q6P0N0 1132 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 MZT2AQ6P582 158 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 CLEC9AQ6UXN8 241 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 RANBP10Q6VN20 620 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 DCDC5Q6ZRR9 648 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 RNF44Q7L0R7 432 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 KRT28Q7Z3Y7 464 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 LIX1LQ8IVB5 337 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 PNPLA1Q8N8W4 532 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 SUN3Q8TAQ9 357 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 SMCR8Q8TEV9 937 aaPredicted RBP2.8□□□□□ -1.96
CHD9-204ENST00000561869 MAP4K1Q92918 833 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 COQ8BQ96D53 544 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 PRR11Q96HE9 360 aaPredicted RBP2.8□□□□□ -1.96
CHD9-204ENST00000561869 TMEM79Q9BSE2 394 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 STEAP1Q9UHE8 339 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 FZD4Q9ULV1 537 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 CORO2BQ9UQ03 480 aa2.8□□□□□ -1.96
CHD9-204ENST00000561869 CLCA1A8K7I4 914 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 RHPN2P1A8MT19 583 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 CLIC1O00299 241 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 FOXN3O00409 490 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 PPEF2O14830 753 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 AREL1O15033 823 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 CA12O43570 354 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 PRAMEF2O60811 474 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 PQBP1O60828 265 aaKnown RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 IL18RAPO95256 599 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 ARP10275 920 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 TSHRP16473 764 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 ADRA1DP25100 572 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 HOXD9P28356 352 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 RBL1P28749 1068 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 NR4A2P43354 598 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 CASP5P51878 434 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 EIF4A1P60842 406 aaKnown RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 CFHR1Q03591 330 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 SLC14A1Q13336 389 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 DNASE1L3Q13609 305 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 ACOX1Q15067 660 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 TRIP6Q15654 476 aaKnown RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 ST3GAL2Q16842 350 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 AASDHQ4L235 1098 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 TMEM63BQ5T3F8 832 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 RRAGBQ5VZM2 374 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 PPP4R4Q6NUP7 873 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 TMEM65Q6PI78 240 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHD9-204ENST00000561869 C9orf106Q8NAJ2 232 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 ATP11CQ8NB49 1132 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 MBD3L2Q8NHZ7 208 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 DENND1AQ8TEH3 1009 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 WIPF2Q8TF74 440 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 IPCEF1Q8WWN9 437 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 TTC17Q96AE7 1141 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 GDF15Q99988 308 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 VPS16Q9H269 839 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 TMEM8AQ9HCN3 771 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms