RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 NANOGP8Q6NSW7 305 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 NSMFQ6X4W1 530 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 USP50Q70EL3 339 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-206ENST00000561781 VASH1Q7L8A9 365 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-206ENST00000561781 LRRC49Q8IUZ0 686 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 TTC39CQ8N584 583 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PCYOX1LQ8NBM8 494 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 THAP11Q96EK4 314 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PCDHB18PQ96TA0 734 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 CEP44Q9C0F1 390 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 EHD1Q9H4M9 534 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 NCKIPSDQ9NZQ3 722 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 PSMD13Q9UNM6 376 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 SORCS3Q9UPU3 1222 aa19.31■□□□□ 0.68
RAB40C-206ENST00000561781 MYOCOSA0A1B0GUC4 107 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 TGFB1I1O43294 461 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 STAT3P40763 770 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 KCNJ8Q15842 424 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 EGFLAMQ63HQ2 1017 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 PGM2L1Q6PCE3 622 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 KBTBD6Q86V97 674 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 ZNF713Q8N859 430 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-206ENST00000561781 GSDMBQ8TAX9 411 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 ACTRT2Q8TDY3 377 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 VPS37BQ9H9H4 285 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 SF3B1O75533 1304 aaKnown RBP eCLIP19.3■□□□□ 0.68
RAB40C-206ENST00000561781 ANKRD34BA5PLL1 514 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 FBXO21O94952 628 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 APOEP02649 317 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 PRKG1Q13976 671 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 OGFOD2Q6N063 350 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 BANPQ8N9N5 519 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 ACP6Q9NPH0 428 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 SLC17A7Q9P2U7 560 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 ERVK-11Q9UQG0 969 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 FRMD4BQ9Y2L6 1034 aa19.3■□□□□ 0.68
RAB40C-206ENST00000561781 DDTLA6NHG4 134 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-206ENST00000561781 KLF11O14901 512 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 PARNO95453 639 aaKnown RBP19.29■□□□□ 0.68
RAB40C-206ENST00000561781 MXI1P50539 228 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 CDK18Q07002 472 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 BPHLQ86WA6 291 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-206ENST00000561781 TMIGD2Q96BF3 282 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 MRIQ9BWK5 157 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 DEFB129Q9H1M3 183 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 FETUBQ9UGM5 382 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 MEIS1O00470 390 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 DHRS4L1P0CG22 281 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 AOC1P19801 751 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 HSD17B4P51659 736 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 EPHB1P54762 984 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 PPP4CP60510 307 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 GK3PQ14409 553 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 CLEC16AQ2KHT3 1053 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 GPR180Q86V85 440 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 SHKBP1Q8TBC3 707 aa19.29■□□□□ 0.68
RAB40C-206ENST00000561781 GNEQ9Y223 722 aaKnown RBP19.29■□□□□ 0.68
RAB40C-206ENST00000561781 C8BP07358 591 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 SERPINA6P08185 405 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 KPNA1P52294 538 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-206ENST00000561781 MYL7Q01449 175 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 ADCY4Q8NFM4 1077 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 HIPK3Q9H422 1215 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 ZNF408Q9H9D4 720 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 HERC5Q9UII4 1024 aaKnown RBP19.28■□□□□ 0.68
RAB40C-206ENST00000561781 POMPQ9Y244 141 aa19.28■□□□□ 0.68
RAB40C-206ENST00000561781 RBMX2Q9Y388 322 aaKnown RBP19.28■□□□□ 0.68
RAB40C-206ENST00000561781 PRR5-ARHGAP8B1AHC4 643 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 GOLGA8RI6L899 631 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 ARHGAP8P85298 464 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 SLC25A3Q00325 362 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 CENPCQ03188 943 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 PDIA2Q13087 525 aaKnown RBP19.27■□□□□ 0.68
RAB40C-206ENST00000561781 GALNT4Q8N4A0 578 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 LRGUKQ96M69 825 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 UBE2TQ9NPD8 197 aaPredicted RBP19.27■□□□□ 0.68
RAB40C-206ENST00000561781 CDH22Q9UJ99 828 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 EXOC7Q9UPT5 735 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 B3GNT3Q9Y2A9 372 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 NOTOA8MTQ0 251 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 MEI4A8MW99 385 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 YWHAGP61981 247 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-206ENST00000561781 EFHC2Q5JST6 749 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 PPP2R2DQ66LE6 453 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 CYP2U1Q7Z449 544 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 RNF169Q8NCN4 708 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 DCPSQ96C86 337 aaKnown RBP19.27■□□□□ 0.68
RAB40C-206ENST00000561781 ISOC1Q96CN7 298 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 CSRNP1Q96S65 589 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 HEMGNQ9BXL5 484 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 SLC2A11Q9BYW1 496 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 EPS15L1Q9UBC2 864 aa19.27■□□□□ 0.68
RAB40C-206ENST00000561781 EML1O00423 815 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 CYP1A2P05177 515 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 INHBBP09529 407 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 MYCLP1P12525 358 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 BGNP21810 368 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms