RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 TSSK4Q6SA08 328 aa16.28■□□□□ 0.2
CCDC113-203ENST00000561517 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
CCDC113-203ENST00000561517 HTR3DQ70Z44 454 aa16.28■□□□□ 0.2
CCDC113-203ENST00000561517 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
CCDC113-203ENST00000561517 ZSWIM1Q9BR11 485 aa16.28■□□□□ 0.2
CCDC113-203ENST00000561517 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
CCDC113-203ENST00000561517 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC113-203ENST00000561517 SDK1Q7Z5N4 2213 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 RALAP11233 206 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 MTIF2P46199 727 aaKnown RBP16.27■□□□□ 0.2
CCDC113-203ENST00000561517 TKTL1P51854 596 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 TRIM65Q6PJ69 517 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 TADA2BQ86TJ2 420 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 FAM114A1Q8IWE2 563 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 BBS7Q8IWZ6 715 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 EZH1Q92800 747 aaPredicted RBP16.27■□□□□ 0.2
CCDC113-203ENST00000561517 CDK5RAP1Q96SZ6 601 aaKnown RBP16.27■□□□□ 0.2
CCDC113-203ENST00000561517 CRACR2AQ9BSW2 395 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 NUDT5Q9UKK9 219 aa16.27■□□□□ 0.2
CCDC113-203ENST00000561517 EML5Q05BV3 1969 aa16.27■□□□□ 0.19
CCDC113-203ENST00000561517 CHURC1-FNTBB4DL54 471 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 K7ESF4 209 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 MDM4O15151 490 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 ZBED1O96006 694 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 ADH1CP00326 375 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 IRF1P10914 325 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 SLC9A1P19634 815 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
CCDC113-203ENST00000561517 HOXA6P31267 233 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
CCDC113-203ENST00000561517 NRLP54845 237 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 GOLGA8FQ08AF8 430 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 GOLGA8DPQ0D2H9 430 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 LY6G5CQ5SRR4 150 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 PKN3Q6P5Z2 889 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 ENOSF1Q7L5Y1 443 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 SCML4Q8N228 414 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 SLC35F5Q8WV83 523 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 FAM81BQ96LP2 452 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 ULBP1Q9BZM6 244 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 UBE2TQ9NPD8 197 aaPredicted RBP16.26■□□□□ 0.19
CCDC113-203ENST00000561517 C2orf42Q9NWW7 574 aa16.26■□□□□ 0.19
CCDC113-203ENST00000561517 USP34Q70CQ2 3546 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 MYO15AQ9UKN7 3530 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 ATG13O75143 517 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 RNF40O75150 1001 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 GABBR2O75899 941 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 LMNAP02545 664 aaKnown RBP16.25■□□□□ 0.19
CCDC113-203ENST00000561517 ADH5P11766 374 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 MFAP3P55082 362 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 YWHAGP61981 247 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC113-203ENST00000561517 ADIGQ0VDE8 80 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 EXOC3L4Q17RC7 722 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 SMYD5Q6GMV2 418 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 Q6ZNB5 142 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
CCDC113-203ENST00000561517 ZNF292O60281 2723 aa16.25■□□□□ 0.19
CCDC113-203ENST00000561517 WDR87Q6ZQQ6 2873 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 M0QYV0 167 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 HOXC11O43248 304 aaPredicted RBP16.24■□□□□ 0.19
CCDC113-203ENST00000561517 STC2O76061 302 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 CALCAP01258 141 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 PON1P27169 355 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 COG7P83436 770 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 GAD2Q05329 585 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 MEA1Q16626 185 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 PMF1Q6P1K2 205 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 C12orf40Q86WS4 652 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 ETFBKMTQ8IXQ9 262 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 SUMF1Q8NBK3 374 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 CCDC26Q8TAB7 109 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
CCDC113-203ENST00000561517 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
CCDC113-203ENST00000561517 HSFY1Q96LI6 401 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 CNGB3Q9NQW8 809 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 SPHK2Q9NRA0 654 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 APEX2Q9UBZ4 518 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 RALGAPA1Q6GYQ0 2036 aa16.24■□□□□ 0.19
CCDC113-203ENST00000561517 SPTBN4Q9H254 2564 aa16.23■□□□□ 0.19
CCDC113-203ENST00000561517 K7EQS6 105 aa16.23■□□□□ 0.19
CCDC113-203ENST00000561517 KRT5P13647 590 aa16.23■□□□□ 0.19
CCDC113-203ENST00000561517 SLC6A11P48066 632 aa16.23■□□□□ 0.19
CCDC113-203ENST00000561517 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms