RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MZF1P28698 734 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 RPL9P32969 192 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 OPRD1P41143 372 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 GRK6P43250 576 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 CDR1P51861 262 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 SERINC3Q13530 473 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 CTTNQ14247 550 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 RTP5Q14D33 572 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 PFKFB3Q16875 520 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 FAM187BQ17R55 369 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MGAT5BQ3V5L5 792 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 EEF1DP3Q658K8 133 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 B4GALNT3Q6L9W6 998 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 ARMCX5Q6P1M9 558 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MAEAQ7L5Y9 396 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 SFTPA1Q8IWL2 248 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 ZCCHC9Q8N567 271 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 ETNPPLQ8TBG4 499 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 TBCKQ8TEA7 893 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 GIPC2Q8TF65 315 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 WFDC12Q8WWY7 111 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MRPS31Q92665 395 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 ZNF419Q96HQ0 510 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 YTHDC1Q96MU7 727 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 ACAP3Q96P50 834 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 RASSF4Q9H2L5 321 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 LINC00597Q9H2U6 94 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 FZD8Q9H461 694 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 ZSWIM4Q9H7M6 989 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 SRA1Q9HD15 236 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 TOPORSQ9NS56 1045 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 RGL1Q9NZL6 768 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 GMIPQ9P107 970 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 TLN1Q9Y490 2541 aaKnown RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 UTP20O75691 2785 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 TNRC6BQ9UPQ9 1833 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 ITPR2Q14571 2701 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 A6NHS1 94 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 GOLGA8AA7E2F4 631 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 GOLGA8BA8MQT2 603 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 LINC01387J3KSC0 135 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 BCAT2O15382 392 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 ZBTB43O43298 467 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 DYRK3O43781 588 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 OAZ2O95190 189 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 KAT7O95251 611 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 LARGE1O95461 756 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 AFPP02771 609 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 APODP05090 189 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 GABRG2P18507 467 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 CR2P20023 1033 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 CDC27P30260 824 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 HSPA4P34932 840 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 TUFMP49411 452 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 NLRP12P59046 1061 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 OSTNP61366 133 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 NFKB2Q00653 900 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 FAM160A1Q05DH4 1040 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 PPP2R5CQ13362 524 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 ZNF268Q14587 947 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 SF3A1Q15459 793 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 TBC1D25Q3MII6 688 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 NKAPLQ5M9Q1 402 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 HES3Q5TGS1 186 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 APOA5Q6Q788 366 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 DBX2Q6ZNG2 339 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 USP49Q70CQ1 688 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 APBB1IPQ7Z5R6 666 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 MON1AQ86VX9 555 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 ERICH1Q86X53 443 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 TPH2Q8IWU9 490 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 ZNF248Q8NDW4 579 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 C18orf25Q96B23 403 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 ERLEC1Q96DZ1 483 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 DYDC2Q96IM9 177 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 PNKPQ96T60 521 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 CCDC94Q9BW85 323 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 C2orf40Q9H1Z8 148 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 TRPC7Q9HCX4 862 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 ANO2Q9NQ90 1003 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 FTSJ1Q9UET6 329 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 RCAN3Q9UKA8 241 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 NAP1L2Q9ULW6 460 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 MAGED2Q9UNF1 606 aaPredicted RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 CENPEQ02224 2701 aa5.74□□□□□ -1.49
HERC1-213ENST00000561359 HELZP42694 1942 aaKnown RBP5.74□□□□□ -1.49
HERC1-213ENST00000561359 NUP210Q8TEM1 1887 aaPredicted RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 CYP3A7-CYP3A51PA0A087WV96 503 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 A0A1B0GVT2 93 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ACKR2O00590 384 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 USO1O60763 962 aaKnown RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 CKMP06732 381 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 HOXB2P14652 356 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 ATF6P18850 670 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 CYP3A7P24462 503 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 WASP42768 502 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 KIR2DL1P43626 348 aaPredicted RBP5.73□□□□□ -1.49
HERC1-213ENST00000561359 SLC6A11P48066 632 aa5.73□□□□□ -1.49
HERC1-213ENST00000561359 BNC1Q01954 994 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms