RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMEM110Q86TL2 294 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
TPM1-229ENST00000561242 VSTM4Q8IW00 320 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 SUGP1Q8IWZ8 645 aaKnown RBP11.21□□□□□ -0.61
TPM1-229ENST00000561242 SCML4Q8N228 414 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 ZMIZ2Q8NF64 920 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 EPS8L1Q8TE68 723 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 EDEM1Q92611 657 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 OTUB2Q96DC9 234 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 NELL2Q99435 816 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 C8orf33Q9H7E9 229 aaPredicted RBP11.21□□□□□ -0.61
TPM1-229ENST00000561242 TRPV4Q9HBA0 871 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 GKN1Q9NS71 199 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM1-229ENST00000561242 ARHGAP26Q9UNA1 814 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 USP3Q9Y6I4 520 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
TPM1-229ENST00000561242 COL4A4P53420 1690 aaPredicted RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 SYNJ2BP-COX16A0A087WUM0 186 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 E2F8A0AVK6 867 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 C2orf78A6NCI8 922 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 LEFTY2O00292 366 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 DLL1O00548 723 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 COCHO43405 550 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ADH1CP00326 375 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 CFHP08603 1231 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MYBL1P10243 752 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 KRT3P12035 628 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 CYLC1P35663 651 aaPredicted RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 ZNF75DP51815 510 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 TBX4P57082 545 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 JAM2P57087 298 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 DAOAP59103 153 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 SLC7A9P82251 487 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 HTR4Q13639 388 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MTF1Q14872 753 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ANO4Q32M45 955 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 CCDC122Q5T0U0 273 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 SNX30Q5VWJ9 437 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 NUGGCQ68CJ6 796 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ACAD10Q6JQN1 1059 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ZNF852Q6ZMS4 543 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 APTXQ7Z2E3 356 aaKnown RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 KIAA1958Q8N8K9 716 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ATP6V0D2Q8N8Y2 350 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 PLD4Q96BZ4 506 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MSANTD3Q96H12 275 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ZSWIM3Q96MP5 696 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 NECAB3Q96P71 396 aaPredicted RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 NCAPGQ9BPX3 1015 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 C11orf70Q9BRQ4 267 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 LRRC3Q9BY71 257 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 CCSER2Q9H7U1 834 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 IL21Q9HBE4 155 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 ACP6Q9NPH0 428 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPM1-229ENST00000561242 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 IL37Q9NZH6 218 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 COX16Q9P0S2 106 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 IMPACTQ9P2X3 320 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 TJP2Q9UDY2 1190 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MUTYHQ9UIF7 546 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 HBS1LQ9Y450 684 aaKnown RBP11.2□□□□□ -0.62
TPM1-229ENST00000561242 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
TPM1-229ENST00000561242 MYO9BQ13459 2157 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 HHLA1C9JL84 531 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ANHXE9PGG2 379 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 RTN2O75298 545 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 RNF8O76064 485 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ADCY5O95622 1261 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 SKILP12757 684 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 GLULP15104 373 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 SDC4P31431 198 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 NOS2P35228 1153 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 SSR1P43307 286 aaKnown RBP11.19□□□□□ -0.62
TPM1-229ENST00000561242 GSDMDP57764 484 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 NME3Q13232 169 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 CLEC16AQ2KHT3 1053 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ITPRIPL2Q3MIP1 535 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ZFYVE27Q5T4F4 411 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 STXBP5Q5T5C0 1151 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
TPM1-229ENST00000561242 LRRC31Q6UY01 552 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 MMS22LQ6ZRQ5 1243 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ZNF276Q8N554 614 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ZNF557Q8N988 423 aaPredicted RBP11.19□□□□□ -0.62
TPM1-229ENST00000561242 SLC20A1Q8WUM9 679 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 CTNNBL1Q8WYA6 563 aaPredicted RBP11.19□□□□□ -0.62
TPM1-229ENST00000561242 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 USP13Q92995 863 aaPredicted RBP11.19□□□□□ -0.62
TPM1-229ENST00000561242 VCPIP1Q96JH7 1222 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms