RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TTI2Q6NXR4 508 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 TTC30AQ86WT1 665 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 SECISBP2LQ93073 1101 aaKnown RBP16.82■□□□□ 0.28
LMX1B-204ENST00000561065 EXOC4Q96A65 974 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 ACDQ96AP0 544 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 P2RY11Q96G91 374 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 TMEM176AQ96HP8 235 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 ZDHHC4Q9NPG8 344 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.82■□□□□ 0.28
LMX1B-204ENST00000561065 TBC1D14Q9P2M4 693 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 USP3Q9Y6I4 520 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 PPP1R3GB7ZBB8 358 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 TULP2O00295 520 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 BIN1O00499 593 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 HOXC11O43248 304 aaPredicted RBP16.81■□□□□ 0.28
LMX1B-204ENST00000561065 RPP40O75818 363 aaKnown RBP16.81■□□□□ 0.28
LMX1B-204ENST00000561065 KAT7O95251 611 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CUL2Q13617 745 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CAMK4Q16566 473 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 ARHGAP17Q68EM7 881 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CEP68Q76N32 757 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC186Q7Z3E2 898 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 TMEM25Q86YD3 366 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 CAMKK1Q8N5S9 505 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 OTUB2Q96DC9 234 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
LMX1B-204ENST00000561065 NACA2Q9H009 215 aa16.81■□□□□ 0.28
LMX1B-204ENST00000561065 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
LMX1B-204ENST00000561065 TRIM24O15164 1050 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 AXIN1O15169 862 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 APBB3O95704 486 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 RARGP13631 454 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 KIR2DL1P43626 348 aaPredicted RBP16.8■□□□□ 0.28
LMX1B-204ENST00000561065 PIGZQ86VD9 579 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC33Q8N5R6 958 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 PNKPQ96T60 521 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 ARHGEF4Q9NR80 690 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 SPHK2Q9NRA0 654 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 MMP17Q9ULZ9 603 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
LMX1B-204ENST00000561065 TNRC6BQ9UPQ9 1833 aaKnown RBP16.8■□□□□ 0.28
LMX1B-204ENST00000561065 NUP205Q92621 2012 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 DCLK1O15075 740 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 P4HA2O15460 535 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 TULP3O75386 442 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
LMX1B-204ENST00000561065 FMO5P49326 533 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 SLC8A3P57103 927 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 LMNB2Q03252 620 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 LRMPQ12912 555 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
LMX1B-204ENST00000561065 GOLGA7BQ2TAP0 167 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 RAB41Q5JT25 222 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 EMC10Q5UCC4 262 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 Q6ZNB5 142 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 HTR3DQ70Z44 454 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 ERMP1Q7Z2K6 904 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 ALLCQ8N6M5 410 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 GPR161Q8N6U8 529 aaKnown RBP16.79■□□□□ 0.28
LMX1B-204ENST00000561065 NAT16Q8N8M0 369 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 IL17RCQ8NAC3 791 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 KAT5Q92993 513 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 SEMA4GQ9NTN9 838 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 NAGPAQ9UK23 515 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 ABCA7Q8IZY2 2146 aa16.79■□□□□ 0.28
LMX1B-204ENST00000561065 SGK1O00141 431 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 PMM2O15305 246 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 LRP3O75074 770 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 ADAM23O75077 832 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 APODP05090 189 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TIE1P35590 1138 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 GAD2Q05329 585 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 PUM1Q14671 1186 aaKnown RBP eCLIP16.78■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC6Q16204 474 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
LMX1B-204ENST00000561065 C10orf120Q5SQS8 335 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 PRR23CQ6ZRP0 262 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 RASSF3Q86WH2 238 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TXNDC5Q8NBS9 432 aaKnown RBP16.78■□□□□ 0.28
LMX1B-204ENST00000561065 MDGA1Q8NFP4 955 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TSTD1Q8NFU3 115 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 LMO3Q8TAP4 145 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TPSD1Q9BZJ3 242 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 NUP62CLQ9H1M0 184 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 EBF1Q9UH73 591 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 RWDD2AQ9UIY3 292 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
LMX1B-204ENST00000561065 THADAQ6YHU6 1953 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms