RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 A0A087X0B3 334 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 ANKRD18BA2A2Z9 1011 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CYSRT1A8MQ03 144 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GSG1L2A8MUP6 293 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 ERVV-1B6SEH8 477 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 AKR1B15C9JRZ8 316 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 UBE2Q2LH0YL09 131 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RPS6KA5O75582 802 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 URI1O94763 535 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 SEC31AO94979 1220 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 MBD4O95243 580 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SERPINC1P01008 464 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GYPCP04921 128 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 PFKMP08237 780 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CCDC175P0C221 793 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 PCP11498 1178 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 SLC5A1P13866 664 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 ATF3P18847 181 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RXRAP19793 462 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 OAS2P29728 719 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 CASQ1P31415 396 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CCKARP32238 428 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 IGFALSP35858 605 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GRIA3P42263 894 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 VAV2P52735 878 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TUBB4BP68371 445 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SPAG1Q07617 926 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GOLGA8FQ08AF8 430 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GOLGA8DPQ0D2H9 430 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 KLF9Q13886 244 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 TRIM29Q14134 588 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SART3Q15020 963 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 BRD3Q15059 726 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 PPP2R5BQ15173 497 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SAFBQ15424 915 aaKnown RBP eCLIP2.74□□□□□ -1.97
SPG11-223ENST00000560858 NPY5RQ15761 445 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 LONRF3Q496Y0 759 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TAF7LQ5H9L4 462 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RRP12Q5JTH9 1297 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 MFSD14BQ5SR56 506 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TEX35Q5T0J7 233 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GORABQ5T7V8 394 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SLC9C2Q5TAH2 1124 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SPATA1Q5VX52 437 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 MORN5Q5VZ52 161 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 KIAA0895LQ68EN5 471 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RAD9BQ6WBX8 426 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TOGARAM2Q6ZUX3 1019 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 BRINP3Q76B58 766 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RASGRP2Q7LDG7 609 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SRGAP1Q7Z6B7 1085 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 HOMER1Q86YM7 354 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RAB11FIP4Q86YS3 637 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CNGA4Q8IV77 575 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SAMD14Q8IZD0 417 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 TXLNBQ8N3L3 684 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SLC43A3Q8NBI5 491 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SLC35B2Q8TB61 432 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SNX33Q8WV41 574 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 LPIN2Q92539 896 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 UBXN4Q92575 508 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GOLGA1Q92805 767 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 DDX17Q92841 729 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 PHKBQ93100 1093 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SMARCE1Q969G3 411 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 EXOC4Q96A65 974 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 NACC2Q96BF6 587 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 DHX58Q96C10 678 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CCDC51Q96ER9 411 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 CEP95Q96GE4 821 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GSDMAQ96QA5 445 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TINF2Q9BSI4 451 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 UTP14AQ9BVJ6 771 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 SLC26A6Q9BXS9 759 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 FUT8Q9BYC5 575 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TSPYL1Q9H0U9 437 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 NAPBQ9H115 298 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 RNF41Q9H4P4 317 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 GREM2Q9H772 168 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 ANKZF1Q9H8Y5 726 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 MRPL44Q9H9J2 332 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 UNKLQ9H9P5 680 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 TRIM39Q9HCM9 518 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 PRDM11Q9NQV5 511 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 TMOD3Q9NYL9 352 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 GPRC5DQ9NZD1 345 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 MYO1AQ9UBC5 1043 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 B4GALT6Q9UBX8 382 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 PPP1R1BQ9UD71 204 aaPredicted RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 CDC23Q9UJX2 597 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.74□□□□□ -1.97
SPG11-223ENST00000560858 CCDC9Q9Y3X0 531 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 LRP12Q9Y561 859 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 SIPA1L1O43166 1804 aa2.74□□□□□ -1.97
SPG11-223ENST00000560858 BAZ2BQ9UIF8 2168 aaKnown RBP2.74□□□□□ -1.97
SPG11-223ENST00000560858 NRXN2Q9P2S2 1712 aa2.73□□□□□ -1.97
SPG11-223ENST00000560858 UBR3Q6ZT12 1888 aa2.73□□□□□ -1.97
SPG11-223ENST00000560858 TNKSO95271 1327 aa2.73□□□□□ -1.97
SPG11-223ENST00000560858 CCDC196A0A1B0GTZ2 297 aa2.73□□□□□ -1.97
SPG11-223ENST00000560858 TRIM75PA6NK02 468 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms