RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ATP5C1P36542 298 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 USP8P40818 1118 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 KPNA1P52294 538 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 NUBP1P53384 320 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 DAOAP59103 153 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 UBXN2BQ14CS0 331 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 SKOR2Q2VWA4 1001 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 DDX42Q86XP3 938 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 TTC16Q8NEE8 873 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 FAM3CQ92520 227 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 MSANTD3Q96H12 275 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 SLC4A5Q9BY07 1137 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 STK33Q9BYT3 514 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 KCNH6Q9H252 994 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 CNGB3Q9NQW8 809 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 SCAMP3O14828 347 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 MED7O43513 233 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 GALR2O43603 387 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 LCP1P13796 627 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 RFX1P22670 979 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 IFNAR2P48551 515 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 YWHAGP61981 247 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 SYCP1Q15431 976 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 SLC47A2Q86VL8 602 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 ARHGAP18Q8N392 663 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 DTWD2Q8NBA8 298 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 CBX8Q9HC52 389 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 DNMT3LQ9UJW3 386 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 PCDHGC3Q9UN70 934 aa16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 MRPS17Q9Y2R5 130 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 ARIH1Q9Y4X5 557 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-213ENST00000560856 PIK3R2O00459 728 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 TEX33O43247 280 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 TPM2P07951 284 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 CHRNB1P11230 501 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 RALAP11233 206 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 GJA4P35212 333 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 JAM2P57087 298 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 PTK2Q05397 1052 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 TCF15Q12870 199 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 RAPGEF1Q13905 1077 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 C10orf120Q5SQS8 335 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 BSPRYQ5W0U4 402 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 NAIF1Q69YI7 327 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 HTR3DQ70Z44 454 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 TMEM110Q86TL2 294 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 SIX6OS1Q8N1H7 587 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 CLEC4CQ8WTT0 213 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 ATP2A3Q93084 1043 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 LHX5Q9H2C1 402 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 FAM207AQ9NSI2 230 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 NDRG2Q9UN36 371 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 HCN4Q9Y3Q4 1203 aa16.02■□□□□ 0.16
SNRPA1-213ENST00000560856 MYOFQ9NZM1 2061 aa16.02■□□□□ 0.15
SNRPA1-213ENST00000560856 F8VZ95 297 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 TRDMT1O14717 391 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 SLC9A3R1O14745 358 aaPredicted RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 CYP17A1P05093 508 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 FYNP06241 537 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 RPS9P46781 194 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 UBXN1Q04323 297 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 RHBDF2Q6PJF5 856 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 Q6ZNB5 142 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 BBS7Q8IWZ6 715 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 IRGQQ8WZA9 623 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 CDK5RAP1Q96SZ6 601 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 NACA2Q9H009 215 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 FBRSL1Q9HCM7 1045 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 TJP2Q9UDY2 1190 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 MIA3Q5JRA6 1907 aa16.01■□□□□ 0.15
SNRPA1-213ENST00000560856 PAPSS1O43252 624 aaPredicted RBP16■□□□□ 0.15
SNRPA1-213ENST00000560856 STC2O76061 302 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 FBXO21O94952 628 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 NFATC1O95644 943 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 KLKB1P03952 638 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 IRF1P10914 325 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 CYP11B1P15538 503 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 ACADSBP45954 432 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 BPIFB4P59827 614 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 POLR2FP61218 127 aaKnown RBP16■□□□□ 0.15
SNRPA1-213ENST00000560856 EFEMP1Q12805 493 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 CCINQ13939 588 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 GAS6Q14393 721 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 PON2Q15165 354 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms