RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRIM2P49643 509 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 CCZ1BP86790 482 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 CCZ1P86791 482 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 TMED1Q13445 227 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 RETSATQ6NUM9 610 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 C16orf89Q6UX73 402 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 EMC1Q8N766 993 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SKA1Q96BD8 255 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 DRG1Q9Y295 367 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 GPC1P35052 558 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SOX11P35716 441 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZBTB17Q13105 803 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 IL1RL2Q9HB29 575 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZBTB39O15060 712 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 MAPK7Q13164 816 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 RIOX2Q8IUF8 465 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 MYO1HQ8N1T3 1032 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 APOL2Q9BQE5 337 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 RAD18Q9NS91 495 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 CDC16Q13042 620 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 DDX42Q86XP3 938 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 SH2D3CQ8N5H7 860 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 CCDC3Q9BQI4 270 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 MFSD1Q9H3U5 465 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 RECQL4O94761 1208 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 RENBPP51606 427 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 OTUD4Q01804 1114 aaKnown RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 ENGASEQ8NFI3 743 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 TFR2Q9UP52 801 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 MYH6P13533 1939 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 TRIM49D1C9J1S8 452 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 PLA2G6O60733 806 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 GAD1Q99259 594 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 PPP1R37O75864 691 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 SLITRK3O94933 977 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 NAA30Q147X3 362 aaPredicted RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 CHI3L2Q15782 390 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 ARMC2Q8NEN0 867 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 E2F7Q96AV8 911 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 THTPAQ9BU02 230 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 UMODL1Q5DID0 1318 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 USP15Q9Y4E8 981 aaPredicted RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 GLP2RO95838 553 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 RFX3P48380 749 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 PABPC1LQ4VXU2 614 aaKnown RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 LRIG3Q6UXM1 1119 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 DIS3LQ8TF46 1054 aaKnown RBP13.88□□□□□ -0.19
TRAF3-208ENST00000560371 TADA1Q96BN2 335 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
TRAF3-208ENST00000560371 PXDNQ92626 1479 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 GUCA1CO95843 209 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ERFP50548 548 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ILDR2Q71H61 639 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 HORMAD1Q86X24 394 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ZFPM1Q8IX07 1006 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 SLC20A1Q8WUM9 679 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 INTS13Q9NVM9 706 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 FBXO10Q9UK96 956 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 RUVBL2Q9Y230 463 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 F8W810 466 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CAND2O75155 1236 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CNTN1Q12860 1018 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 PRAMEF19Q5SWL8 479 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 SETD3Q86TU7 594 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ATG4AQ8WYN0 398 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ISCUQ9H1K1 167 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 UBP1Q9NZI7 540 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ZNF606Q8WXB4 792 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TMEM121Q9BTD3 319 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 HPS4Q9NQG7 708 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NFASCO94856 1347 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 MAP1BP46821 2468 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 DEPDC5O75140 1603 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms